RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 CCL3P10147 92 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 NR2F1P10589 423 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
NUP54-203ENST00000504173 CYP4B1P13584 511 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 PNLIPRP2P54317 469 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 MTPNP58546 118 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 MXRA7P84157 204 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SELPLGQ14242 412 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.2□□□□□ -0.94
NUP54-203ENST00000504173 NADK2Q4G0N4 442 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 GPAT3Q53EU6 434 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 ZNF766Q5HY98 468 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 GCNT6Q5T4J0 391 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SLC22A10Q63ZE4 541 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SLC6A19Q695T7 634 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 DESI1Q6ICB0 168 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SLC25A25Q6KCM7 469 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 HEPHL1Q6MZM0 1159 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 NANOGP8Q6NSW7 305 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 HACD2Q6Y1H2 254 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 Q6ZS92 163 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 MDGA2Q7Z553 956 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 ZNF227Q86WZ6 799 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 TMEM178AQ8NBL3 297 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 CHDHQ8NE62 594 aaPredicted RBP9.2□□□□□ -0.94
NUP54-203ENST00000504173 OR8J3Q8NGG0 315 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 FAM110BQ8TC76 370 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SPPL2AQ8TCT8 520 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 HGDQ93099 445 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 TMCO6Q96DC7 493 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 NSL1Q96IY1 281 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SH3GL1Q99961 368 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 HES7Q9BYE0 225 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 IKZF5Q9H5V7 419 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 METTL7AQ9H8H3 244 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 NANOGQ9H9S0 305 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 SACM1LQ9NTJ5 587 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 THUMPD1Q9NXG2 353 aaKnown RBP9.2□□□□□ -0.94
NUP54-203ENST00000504173 CNIH4Q9P003 139 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 P2RX2Q9UBL9 471 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 B3GNT3Q9Y2A9 372 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 KLF13Q9Y2Y9 288 aaPredicted RBP9.2□□□□□ -0.94
NUP54-203ENST00000504173 GMEB1Q9Y692 573 aa9.2□□□□□ -0.94
NUP54-203ENST00000504173 STAB1Q9NY15 2570 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 C15orf38-AP3S2A0A0A6YYH1 394 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 PRAMEF25A6NGN4 478 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 G3V3Y1 287 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 NME2P1O60361 137 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 ICOSLGO75144 302 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 SORBS2O94875 1100 aaKnown RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 UTS2O95399 124 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 SP1P08047 785 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 NUDT7P0C024 238 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 BMP2P12643 396 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 GPX2P18283 190 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 NME2P22392 152 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 CALB2P22676 271 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 EVI2BP34910 448 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 MNAT1P51948 309 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 FUT5Q11128 374 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 MRPL49Q13405 166 aaKnown RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 CYP51A1Q16850 503 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 ARHGAP11BQ3KRB8 267 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 RABL3Q5HYI8 236 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 PRAMEF20Q5VT98 475 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 GALNTL5Q7Z4T8 443 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 ARPINQ7Z6K5 226 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 ZAR1Q86SH2 424 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 FBXW8Q8N3Y1 598 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 ANKFN1Q8N957 763 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 PAQR8Q8TEZ7 354 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 PNPLA2Q96AD5 504 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 SCMH1Q96GD3 660 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 NODALQ96S42 347 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 SECISBP2Q96T21 854 aaKnown RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 SDF2Q99470 211 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 HOPXQ9BPY8 73 aaPredicted RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 OSBPL11Q9BXB4 747 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 SH2D2AQ9NP31 389 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 FBXO34Q9NWN3 711 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 KLRF1Q9NZS2 232 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 LUZP4Q9P127 313 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 CNOT11Q9UKZ1 510 aaKnown RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 LIPT1Q9Y234 373 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 L3MBTL1Q9Y468 752 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 CHCHD2Q9Y6H1 151 aaPredicted RBP9.19□□□□□ -0.94
NUP54-203ENST00000504173 EXPH5Q8NEV8 1989 aa9.19□□□□□ -0.94
NUP54-203ENST00000504173 NPIPA5A0A0B4J1W7 369 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 PRAMEF27A3QJZ7 478 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 CCT8L1PA6NM43 557 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 C5orf58C9J3I9 102 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 NPIPA7E9PJI5 369 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 SCO2O43819 266 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 TNFRSF21O75509 655 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 STX11O75558 287 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 UBOX5O94941 541 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 H6PDO95479 791 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 BCHEP06276 602 aa9.18□□□□□ -0.94
NUP54-203ENST00000504173 CHRM4P08173 479 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms