RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 KRTAP1-1Q07627 177 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 C2orf80Q0P641 193 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 CAPRIN1Q14444 709 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 EXOC3L2Q2M3D2 409 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 CTU2Q2VPK5 515 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 ZNF704Q6ZNC4 412 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 PLEKHM3Q6ZWE6 761 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 CDC26Q8NHZ8 85 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 ELP4Q96EB1 424 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 ADGRG7Q96K78 797 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 AMDHD1Q96NU7 426 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 TSPYL1Q9H0U9 437 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 GSTO2Q9H4Y5 243 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 MYNNQ9NPC7 610 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 DDX18Q9NVP1 670 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 ADAM21Q9UKJ8 722 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 CR1P17927 2039 aa12.67□□□□□ -0.38
POLR2J3-207ENST00000503564 SONP18583 2426 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 GXYLT2A0PJZ3 443 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 UBFD1O14562 309 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 UTS2O95399 124 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 ANGPTL1O95841 491 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 PLAUP00749 431 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 PPP3CBP16298 524 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 IL11P20809 199 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 NTSP30990 170 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 RFX3P48380 749 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 C17orf67Q0P5P2 114 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 SGCBQ16585 318 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 GRAMD1BQ3KR37 738 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 LGSNQ5TDP6 509 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 SH2D5Q6ZV89 423 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 SLC22A9Q8IVM8 553 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 NPAS1Q99742 590 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 TMEM204Q9BSN7 226 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 TBL1XR1Q9BZK7 514 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 MIEF1Q9NQG6 463 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 MRTO4Q9UKD2 239 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 CLEC4AQ9UMR7 237 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 POLR3HQ9Y535 204 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 FREM1Q5H8C1 2179 aa12.66□□□□□ -0.38
POLR2J3-207ENST00000503564 EXOC1LA0A1B0GW35 172 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 EIF1AYO14602 144 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 GMFGO60234 142 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 TMCC2O75069 709 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 SOX30O94993 753 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 PSMA4P25789 261 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 MAP3K8P41279 467 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 CLK3P49761 638 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 PPP2R2BQ00005 443 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 GTPBP8Q8N3Z3 284 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 MMGT1Q8N4V1 131 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 PIK3R3Q92569 461 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
POLR2J3-207ENST00000503564 C7orf72A4D263 438 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 CCDC151A5D8V7 595 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 TTC36A6NLP5 189 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ALG1L2C9J202 215 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 HS3ST1O14792 307 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ADAMDEC1O15204 470 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ABHD2P08910 425 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 GABRA3P34903 492 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 NR1H2P55055 460 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ZNF844Q08AG5 666 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 SPDYAQ5MJ70 313 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 PPP4R4Q6NUP7 873 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 IKBIPQ70UQ0 350 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 CXXC5Q7LFL8 322 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 TRIM46Q7Z4K8 759 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 GALNT10Q86SR1 603 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 FAM76AQ8TAV0 307 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 PLPPR2Q96GM1 343 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 ACTR6Q9GZN1 396 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 OR10A4Q9H209 315 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 CXorf56Q9H5V9 222 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 C3orf14Q9HBI5 128 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 MCTS1Q9ULC4 181 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 WBP11Q9Y2W2 641 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-207ENST00000503564 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.63□□□□□ -0.39
POLR2J3-207ENST00000503564 A0A087WZY1 265 aa12.63□□□□□ -0.39
POLR2J3-207ENST00000503564 CXCL13O43927 109 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms