RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 C1GALT1C1Q96EU7 318 aa14.67□□□□□ -0.06
SCLT1-204ENST00000503215 LRRC46Q96FV0 321 aa14.67□□□□□ -0.06
SCLT1-204ENST00000503215 ZNF845Q96IR2 970 aaPredicted RBP14.67□□□□□ -0.06
SCLT1-204ENST00000503215 NTMQ9P121 344 aa14.67□□□□□ -0.06
SCLT1-204ENST00000503215 LGALS13Q9UHV8 139 aa14.67□□□□□ -0.06
SCLT1-204ENST00000503215 ST6GALNAC2Q9UJ37 374 aa14.67□□□□□ -0.06
SCLT1-204ENST00000503215 SETD2Q9BYW2 2564 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 SEC14L5O43304 696 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 PEX11AO75192 247 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 NKX2-2O95096 273 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 ANGPTL1O95841 491 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 NEFHP12036 1026 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 PEX19P40855 299 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 DUSP5Q16690 384 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 VWA1Q6PCB0 445 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 FIGNL1Q6PIW4 674 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 SZRD1Q7Z422 152 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 GATSQ8NAP1 163 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 AENQ8WTP8 325 aaKnown RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 STARD4Q96DR4 205 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 ZNF764Q96H86 408 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 IQCGQ9H095 443 aaKnown RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 SDHAF3Q9NRP4 125 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 SIRT3Q9NTG7 399 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 ZDHHC2Q9UIJ5 367 aa14.66□□□□□ -0.06
SCLT1-204ENST00000503215 V9GYY5 206 aaPredicted RBP14.66□□□□□ -0.06
SCLT1-204ENST00000503215 IGLV3-32A0A0A0MS00 114 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 A0A1W2PPR1 153 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 SLC22A20A6NK97 555 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 A8MXE2 369 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 H3BML4 177 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 CHEK2O96017 543 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 IFI6P09912 130 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 LAMP1P11279 417 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 PEPDP12955 493 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 CPA2P48052 419 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 PRR5P85299 388 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 POU4F3Q15319 338 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 TMEM44Q2T9K0 475 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 XKR7Q5GH72 579 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 CCNJQ5T5M9 372 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 MFSD12Q6NUT3 480 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 BTLAQ7Z6A9 289 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 FAM110BQ8TC76 370 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 SMPDL3BQ92485 455 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ZBTB9Q96C00 473 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ZBED6CLQ96FA7 236 aaPredicted RBP14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ZFP3Q96NJ6 502 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 C1orf50Q9BV19 199 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 TBL1XR1Q9BZK7 514 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ZNF395Q9H8N7 513 aaPredicted RBP14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ACSS1Q9NUB1 689 aaPredicted RBP14.65□□□□□ -0.06
SCLT1-204ENST00000503215 MRTO4Q9UKD2 239 aaKnown RBP14.65□□□□□ -0.06
SCLT1-204ENST00000503215 ACANP16112 2415 aa14.65□□□□□ -0.06
SCLT1-204ENST00000503215 NUP214P35658 2090 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 KCNK2O95069 426 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 KCNH1O95259 989 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 OXSR1O95747 527 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 OPN1LWP04000 364 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 CD1EP15812 388 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 KIR2DL2P43627 348 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 SORDQ00796 357 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 FAM27E3Q08E93 113 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 IFFO1Q0D2I5 559 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 PTGR1Q14914 329 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 EXOSC6Q5RKV6 272 aaKnown RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 ZNF474Q6S9Z5 364 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 RIBC1Q8N443 379 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 KRTCAP2Q8N6L1 136 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 CNEP1R1Q8N9A8 125 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 CDRT4Q8N9R6 151 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 OR6Y1Q8NGX8 325 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 CEP70Q8NHQ1 597 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 GOT1L1Q8NHS2 421 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 ZFP28Q8NHY6 868 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 FNDC9Q8TBE3 224 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 FAM120BQ96EK7 910 aaKnown RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 PINK1Q9BXM7 581 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 C3orf14Q9HBI5 128 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 ARGLU1Q9NWB6 273 aaPredicted RBP14.64□□□□□ -0.07
SCLT1-204ENST00000503215 ATP6V1HQ9UI12 483 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 PACSIN3Q9UKS6 424 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 VDAC3Q9Y277 283 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 TMED5Q9Y3A6 229 aa14.64□□□□□ -0.07
SCLT1-204ENST00000503215 SCAMP2O15127 329 aaKnown RBP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 EMC8O43402 210 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 SMNDC1O75940 238 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 AQP8O94778 261 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 SLC6A8P48029 635 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 CLK3P49761 638 aaKnown RBP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 RNF144AP50876 292 aaPredicted RBP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 PSMD4P55036 377 aaKnown RBP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 SIRPAP78324 504 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 C17orf67Q0P5P2 114 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 GANABQ14697 944 aaKnown RBP14.63□□□□□ -0.07
SCLT1-204ENST00000503215 C6orf136Q5SQH8 315 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 CHMP1BQ7LBR1 199 aa14.63□□□□□ -0.07
SCLT1-204ENST00000503215 MEIOBQ8N635 442 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms