RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 CCDC190Q86UF4 302 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 OR6V1Q8N148 313 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 C7orf34Q96L11 122 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 SUSD2Q9UGT4 822 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 CLEC2DQ9UHP7 191 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 AK6Q9Y3D8 172 aaKnown RBP16.25■□□□□ 0.19
HMGXB3-201ENST00000502717 SLC1A3P43003 542 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 MTNR1BP49286 362 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 ODF4Q2M2E3 257 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 NDUFAF5Q5TEU4 345 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 CFAP77Q6ZQR2 320 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 SLC9B2Q86UD5 537 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TCTE3Q8IZS6 198 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 NLGN4XQ8N0W4 816 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PELOQ9BRX2 385 aaKnown RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 IL20RAQ9UHF4 553 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 CD34P28906 385 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEM35AQ53FP2 167 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEM107Q6UX40 140 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 C3orf58Q8NDZ4 430 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 OR4K14Q8NGD5 310 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 OR6F1Q8NGZ6 308 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 SMIM14Q96QK8 99 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PLSCR3Q9NRY6 295 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 MYADML2A6NDP7 307 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PSMD9O00233 223 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 GMDSO60547 372 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 CYBAP13498 195 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 NFYAP23511 347 aaPredicted RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 AK4P27144 223 aaPredicted RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 HTRA3P83110 453 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 SAXO2Q658L1 398 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 GPR26Q8NDV2 337 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF582Q96NG8 517 aaPredicted RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 CNTNAP3BQ96NU0 1288 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 KLK8O60259 260 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 UBXN7O94888 489 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 GALTP07902 379 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TYRP14679 529 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PPP3CBP16298 524 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TPMTP51580 245 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PCGF3Q3KNV8 242 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PLEKHN1Q494U1 663 aaPredicted RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 FOXRED2Q8IWF2 684 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 NUDT8Q8WV74 236 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 PCNPQ8WW12 178 aaKnown RBP16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 TM9SF4Q92544 642 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 S100PBPQ96BU1 408 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 RADILQ96JH8 1075 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 SLC6A16Q9GZN6 736 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 RGCCQ9H4X1 137 aa16.24■□□□□ 0.19
HMGXB3-201ENST00000502717 BLOC1S5-TXNDC5H3BN57 136 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 RGS13O14921 159 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 PSMB1P20618 241 aaKnown RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OCLNQ16625 522 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 FAHD1Q6P587 224 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 CAMKVQ8NCB2 501 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 PRRG4Q9BZD6 226 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 MTHFD2LQ9H903 347 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TMEM14AQ9Y6G1 99 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TRBV23OR9-2A0A075B6M9 112 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 PPM1BO75688 479 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 KAT7O95251 611 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 CSF1P09603 554 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TFPIP10646 304 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 NDUFS1P28331 727 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 STK19P49842 368 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 DBPQ10586 325 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 FGL2Q14314 439 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 USF2Q15853 346 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TCTE1Q5JU00 501 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OR4C11Q6IEV9 310 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF550Q7Z398 422 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OR52I1Q8NGK6 324 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OR5D16Q8NGK9 328 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 CYB5D2Q8WUJ1 264 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TCEAL3Q969E4 200 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 NEIL2Q969S2 332 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ACTR10Q9NZ32 417 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 GRHPRQ9UBQ7 328 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 TAPBPO15533 448 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF20P17024 532 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 NKAPLQ5M9Q1 402 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 BTN2A1Q7KYR7 527 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ZNF101Q8IZC7 436 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ACOT11Q8WXI4 607 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 UBL3O95164 117 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 UGT2B7P16662 529 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 RNF144AP50876 292 aaPredicted RBP16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ULK3Q6PHR2 472 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 IKZF5Q9H5V7 419 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 OR2S2Q9NQN1 319 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 ASF1BQ9NVP2 202 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 NDUFB11Q9NX14 153 aa16.23■□□□□ 0.19
HMGXB3-201ENST00000502717 RNF13O43567 381 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms