RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 A0A087WV62 115 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 MYO1GB0I1T2 1018 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 CLOCKO15516 846 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 CXCL13O43927 109 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 UTS2O95399 124 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 PSMG1O95456 288 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 IL33O95760 270 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 IFNA2P01563 188 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 IGHV4-39P01824 125 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 AGTR1P30556 359 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 TIA1P31483 386 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 MPIP34949 423 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 IDUAP35475 653 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 HSD17B3P37058 310 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 NCBP2P52298 156 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 TSC22D1Q15714 1073 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 TSNAXIP1Q2TAA8 658 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 GALNT10Q86SR1 603 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 ATG4DQ86TL0 474 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 SLC9A6Q92581 669 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 FBXW5Q969U6 566 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 GTPBP3Q969Y2 492 aaKnown RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 TBL1XR1Q9BZK7 514 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 RAB17Q9H0T7 212 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 MRPL46Q9H2W6 279 aaKnown RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 ACSS3Q9H6R3 686 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 Q9N2J8 555 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 MCTS1Q9ULC4 181 aaKnown RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
TRAF4-212ENST00000498540 LIPT1Q9Y234 373 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 GPR52Q9Y2T5 361 aa13.12□□□□□ -0.31
TRAF4-212ENST00000498540 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 UPK1AO00322 258 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 TNFSF11O14788 317 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 ADAM11O75078 769 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 NDUFS7O75251 213 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 IGKV1D-16P01601 117 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 KRT6AP02538 564 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 KRT6BP04259 564 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 THBS1P07996 1170 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 ZNF17P17021 662 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 KRT6CP48668 564 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 CLK3P49761 638 aaKnown RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 PRR5P85299 388 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 CLCQ05315 142 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 ACSM2AQ08AH3 577 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 C17orf67Q0P5P2 114 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 RASA2Q15283 850 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 GRAMD1BQ3KR37 738 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 SPIN4Q56A73 249 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 ACSM2BQ68CK6 577 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 DNM1P46Q6ZS02 220 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 STK32CQ86UX6 486 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 WDR75Q8IWA0 830 aaKnown RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 OR2L13Q8N349 312 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 TMEM151AQ8N4L1 468 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 CDC26Q8NHZ8 85 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 SMAP2Q8WU79 429 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 TMEM158Q8WZ71 300 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 ZBED6CLQ96FA7 236 aaPredicted RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
TRAF4-212ENST00000498540 TMEM185BQ9H7F4 350 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
TRAF4-212ENST00000498540 GXYLT2A0PJZ3 443 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 ULK1O75385 1050 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 SYNGR4O95473 234 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 NTN1O95631 604 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 TUBBP07437 444 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 CD3EP07766 207 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 DDCP20711 480 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 PSMA4P25789 261 aaKnown RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 BTKQ06187 659 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 FAPQ12884 760 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 PGGHGQ32M88 737 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 CHRFAM7AQ494W8 412 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 GALNT18Q6P9A2 607 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 ZNF619Q8N2I2 560 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 GTPBP8Q8N3Z3 284 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 STEAP2Q8NFT2 490 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 KBTBD8Q8NFY9 601 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 OR2V1Q8NHB1 315 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 ZNF382Q96SR6 550 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 KLHDC3Q9BQ90 382 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 LMF2Q9BU23 707 aaKnown RBP13.1□□□□□ -0.31
TRAF4-212ENST00000498540 GLRX2Q9NS18 164 aa13.1□□□□□ -0.31
TRAF4-212ENST00000498540 DDX18Q9NVP1 670 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms