RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CNRIP1Q96F85 164 aaPredicted RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 ZNF681Q96N22 645 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 PAFAH2Q99487 392 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 C12orf49Q9H741 205 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 CISD1Q9NZ45 108 aaKnown RBP14.67□□□□□ -0.06
VIM-208ENST00000497849 RNF11Q9Y3C5 154 aa14.67□□□□□ -0.06
VIM-208ENST00000497849 EXOC1LA0A1B0GW35 172 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 C1orf226A1L170 272 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SLC35F4A4IF30 521 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SHISA8B8ZZ34 492 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 FADS1O60427 444 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 UGDHO60701 494 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 RAMP1O60894 148 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 KERAO60938 352 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SIX3O95343 332 aaPredicted RBP14.66□□□□□ -0.06
VIM-208ENST00000497849 PGRP06401 933 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 ADH6P28332 368 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SPRP35270 261 aaPredicted RBP14.66□□□□□ -0.06
VIM-208ENST00000497849 DSCR9P59020 149 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 NAB1Q13506 487 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 TMEM44Q2T9K0 475 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 CCNYL2Q5T2Q4 361 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 MROH9Q5TGP6 573 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 CLEC2AQ6UVW9 174 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 STK32CQ86UX6 486 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 GABRG1Q8N1C3 465 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 PIWIL2Q8TC59 973 aaKnown RBP14.66□□□□□ -0.06
VIM-208ENST00000497849 C1GALT1C1Q96EU7 318 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 ADGRG7Q96K78 797 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 VSTM2LQ96N03 204 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SERPINI1Q99574 410 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 GPR22Q99680 433 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 MRPL1Q9BYD6 325 aaKnown RBP14.66□□□□□ -0.06
VIM-208ENST00000497849 MANSC1Q9H8J5 431 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 FLRT3Q9NZU0 649 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 ADAM29Q9UKF5 820 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
VIM-208ENST00000497849 SMIM23A6NLE4 172 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 SHISA9B4DS77 424 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 EIF1AYO14602 144 aaKnown RBP14.65□□□□□ -0.06
VIM-208ENST00000497849 INHBAP08476 426 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 SLC25A16P16260 332 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 AGTR1P30556 359 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 KRT20P35900 424 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 C21orf58P58505 322 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 RAB10P61026 200 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 STX5Q13190 355 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 CASP8Q14790 479 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 GLYR1Q49A26 553 aaPredicted RBP14.65□□□□□ -0.06
VIM-208ENST00000497849 ZNF628Q5EBL2 1059 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 FAM120AOSQ5T036 256 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 CMC1Q7Z7K0 106 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 ZNF525Q8N782 197 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 L3MBTL4Q8NA19 623 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 OR52B6Q8NGF0 335 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 OR10D3Q8NH80 312 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 HSD17B8Q92506 261 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 HTRA1Q92743 480 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 KLHL29Q96CT2 875 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 HBEGFQ99075 208 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 HDHD5Q9BXW7 423 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 NGBQ9NPG2 151 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 FBXO34Q9NWN3 711 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 XPR1Q9UBH6 696 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 SNX8Q9Y5X2 465 aa14.65□□□□□ -0.06
VIM-208ENST00000497849 TGP01266 2768 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 ATP8B1O43520 1251 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 NTN1O95631 604 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 FESP07332 822 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 CFPP27918 469 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 MAPK12P53778 367 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 ILF2Q12905 390 aaKnown RBP14.64□□□□□ -0.07
VIM-208ENST00000497849 SFRP5Q5T4F7 317 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 LIPNQ5VXI9 398 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 ZNF675Q8TD23 568 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 EPS8L3Q8TE67 593 aaKnown RBP14.64□□□□□ -0.07
VIM-208ENST00000497849 TRPC4APQ8TEL6 797 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 DUSP19Q8WTR2 217 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 TM4SF18Q96CE8 201 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 CACNG6Q9BXT2 260 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 PTGES2Q9H7Z7 377 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 IPPKQ9H8X2 491 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 CHODLQ9H9P2 273 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 GLRX2Q9NS18 164 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 ZNF446Q9NWS9 450 aa14.64□□□□□ -0.07
VIM-208ENST00000497849 TLDC2A0PJX2 215 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 CXCL13O43927 109 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 DLX3O60479 287 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 IRF9Q00978 393 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 LGSNQ5TDP6 509 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 C11orf71Q6IPW1 123 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 GOLGA7Q7Z5G4 137 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 GALNT10Q86SR1 603 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 MEX3DQ86XN8 651 aaKnown RBP14.63□□□□□ -0.07
VIM-208ENST00000497849 SLC44A2Q8IWA5 706 aaPredicted RBP14.63□□□□□ -0.07
VIM-208ENST00000497849 METTL4Q8N3J2 472 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 C10orf105Q8TEF2 133 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 KAT2AQ92830 837 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 C1orf159Q96HA4 380 aa14.63□□□□□ -0.07
VIM-208ENST00000497849 ADAD1Q96M93 576 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms