RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FEM1AQ9BSK4 669 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 TMEM121Q9BTD3 319 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 DPH7Q9BTV6 452 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 MRPL13Q9BYD1 178 aaKnown RBP3.53□□□□□ -1.84
VPS36-206ENST00000497149 MIEF1Q9NQG6 463 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 ZNF275Q9NSD4 429 aaPredicted RBP3.53□□□□□ -1.84
VPS36-206ENST00000497149 HPF1Q9NWY4 346 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 CHMP2BQ9UQN3 213 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 U3KQV3 271 aa3.53□□□□□ -1.84
VPS36-206ENST00000497149 CARMIL1Q5VZK9 1371 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 LATO43561 262 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 DIRAS3O95661 229 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 AK1P00568 194 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 ANXA3P12429 323 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 BCKDHAP12694 445 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 PTBP1P26599 531 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS36-206ENST00000497149 NOVA1P51513 510 aaKnown RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 IGLV3-21P80748 117 aaPredicted RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 KCNJ11Q14654 390 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 KRT71Q3SY84 523 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 TMEM52BQ4KMG9 183 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 PRR30Q53SZ7 412 aaPredicted RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 FAM120AOSQ5T036 256 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 LRRC70Q7Z2Q7 622 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 IFNEQ86WN2 208 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 ZNF584Q8IVC4 421 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 SPEM1Q8N4L4 309 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 OR5AU1Q8NGC0 362 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 C18orf25Q96B23 403 aaPredicted RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 DHTKD1Q96HY7 919 aaPredicted RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 SLITRK2Q9H156 845 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 POLR3FQ9H1D9 316 aaPredicted RBP3.52□□□□□ -1.85
VPS36-206ENST00000497149 COG4Q9H9E3 785 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 VNN3Q9NY84 501 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 RDH8Q9NYR8 311 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 B9D1Q9UPM9 204 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 AURKCQ9UQB9 309 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 L3MBTL1Q9Y468 752 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 ADAMTS9Q9P2N4 1935 aa3.52□□□□□ -1.85
VPS36-206ENST00000497149 E9PLD3 99 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 DUX1O43812 170 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 STX11O75558 287 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 TNNI3P19429 210 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 KLK2P20151 261 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 ZNF154Q13106 437 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 DPYSL3Q14195 570 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 TTC31Q49AM3 519 aaPredicted RBP3.51□□□□□ -1.85
VPS36-206ENST00000497149 LINC01620Q4KN68 170 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 TEX44Q53QW1 395 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 UFSP1Q6NVU6 142 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 SCYL2Q6P3W7 929 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 LANCL3Q6ZV70 420 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 GPR65Q8IYL9 337 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 ZSCAN4Q8NAM6 433 aaPredicted RBP3.51□□□□□ -1.85
VPS36-206ENST00000497149 TSSK1BQ9BXA7 367 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 GLT8D2Q9H1C3 349 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 PNO1Q9NRX1 252 aaKnown RBP3.51□□□□□ -1.85
VPS36-206ENST00000497149 MFHAS1Q9Y4C4 1052 aa3.51□□□□□ -1.85
VPS36-206ENST00000497149 SAGE2PA6NJ88 616 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 FAM74A7A6NL05 159 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 K7EPI3 171 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 CDX4O14627 284 aaPredicted RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 JAK2O60674 1132 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 ANP32DO95626 131 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 MBD3O95983 291 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 CHRNA1P02708 482 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 NCF1P14598 390 aaPredicted RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 PRKAR2BP31323 418 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 KIF5BP33176 963 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 NF2P35240 595 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 MDH1P40925 334 aaKnown RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 TRPC1P48995 793 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 RPL8P62917 257 aaKnown RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 KIAA0040Q15053 153 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 RNF212Q495C1 297 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 FAM74A3Q4VXF1 159 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 ASPHD2Q6ICH7 369 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 AFTPHQ6ULP2 937 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 CBLN3Q6UW01 205 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 APOBEC3FQ8IUX4 373 aaKnown RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 CNPY4Q8N129 248 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 OR13F1Q8NGS4 319 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 OR9A4Q8NGU2 314 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 FAF2Q96CS3 445 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 TMEM80Q96HE8 168 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 C16orf45Q96MC5 204 aaPredicted RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 DPH5Q9H2P9 285 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 RHOJQ9H4E5 214 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 COQ10BQ9H8M1 238 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 WDR76Q9H967 626 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 LIN28AQ9H9Z2 209 aaKnown RBP3.5□□□□□ -1.85
VPS36-206ENST00000497149 CYTH4Q9UIA0 394 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 CRLS1Q9UJA2 301 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 CLEC4EQ9ULY5 219 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 MOKQ9UQ07 419 aa3.5□□□□□ -1.85
VPS36-206ENST00000497149 IGLV8-61A0A075B6I0 122 aa3.49□□□□□ -1.85
VPS36-206ENST00000497149 KLF18A0A0U1RQI7 1052 aa3.49□□□□□ -1.85
VPS36-206ENST00000497149 SMPD2O60906 423 aa3.49□□□□□ -1.85
VPS36-206ENST00000497149 IFNB1P01574 187 aa3.49□□□□□ -1.85
VPS36-206ENST00000497149 CD55P08174 381 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms