RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PIBF1Q8WXW3 757 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 C16orf58Q96GQ5 468 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 PAXXQ9BUH6 204 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 C6orf50Q9HD87 102 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 PRMT8Q9NR22 394 aaPredicted RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 AGPAT5Q9NUQ2 364 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 SLCO1C1Q9NYB5 712 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 ANGPTL2Q9UKU9 493 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 GPR132Q9UNW8 380 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 RNF24Q9Y225 148 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 PIN4Q9Y237 131 aaKnown RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 NUP210Q8TEM1 1887 aaPredicted RBP3.73□□□□□ -1.81
MDM2-220ENST00000496959 CACNA1GO43497 2377 aa3.73□□□□□ -1.81
MDM2-220ENST00000496959 C5orf42Q9H799 3197 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 TICRRQ7Z2Z1 1910 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 USP34Q70CQ2 3546 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 CITO14578 2027 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 DOCK6Q96HP0 2047 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 GTPBP10A4D1E9 387 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 SMCO2A6NFE2 343 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 DDX39AO00148 427 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 KIAA0513O60268 411 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 CSO75390 466 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 RAD51DO75771 328 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 DCNP07585 359 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 RETP07949 1114 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 BDNFP23560 247 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 GJB2P29033 226 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 HMGCLP35914 325 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 GP5P40197 560 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 TNFRSF4P43489 277 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 SLC11A1P49279 550 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 ERVPABLB-1P60509 514 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 AKAP17AQ02040 695 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 CSTF1Q05048 431 aaKnown RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 EIF4EBP2Q13542 120 aaPredicted RBP3.72□□□□□ -1.81
MDM2-220ENST00000496959 TFDP1Q14186 410 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 EMC2Q15006 297 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 UBE2SQ16763 222 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 ARL14Q8N4G2 192 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 GVQW1Q8N7I0 195 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 LEMD2Q8NC56 503 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 ICA1LQ8NDH6 482 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 OR1K1Q8NGR3 316 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 CLDN23Q96B33 292 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 MBOAT7Q96N66 472 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 TEKT3Q9BXF9 490 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 AP1M1Q9BXS5 423 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 NT5C3AQ9H0P0 336 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 ZNF292O60281 2723 aa3.72□□□□□ -1.81
MDM2-220ENST00000496959 PHLPP2Q6ZVD8 1323 aa3.71□□□□□ -1.81
MDM2-220ENST00000496959 KMT2BQ9UMN6 2715 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 IGLV3-22A0A075B6J6 115 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 TRAV34A0A0B4J273 112 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 IGKV6-21A0A0C4DH24 114 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 HMGB1P1B2RPK0 211 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 H7C0S8 307 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 TRAPPC3O43617 180 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 TSC22D2O75157 780 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 ECI2O75521 394 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 CSDE1O75534 798 aaKnown RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 PLEKHA8P1O95397 391 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 IGHG3P01860 377 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 GSTA2P09210 222 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 CCDC159P0C7I6 412 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 P4HA1P13674 534 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 OR1G1P47890 313 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 CCR4P51679 360 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 SLC25A1P53007 311 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 PSMC5P62195 406 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 MXD4Q14582 209 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 ANKRD55Q3KP44 614 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 C14orf28Q4W4Y0 310 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 PPM1LQ5SGD2 360 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 GALNT17Q6IS24 598 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 CAPN13Q6MZZ7 669 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 CYP4V2Q6ZWL3 525 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 OTUD6AQ7L8S5 288 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 MIER3Q7Z3K6 550 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 ZNF491Q8N8L2 437 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 CCDC197Q8NCU1 140 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 DEPDC1BQ8WUY9 529 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 ELSPBP1Q96BH3 223 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 NUS1Q96E22 293 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 RAB40CQ96S21 281 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 RASL10BQ96S79 203 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 NFKBIZQ9BYH8 718 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 LRRC2Q9BYS8 371 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 TRPV5Q9NQA5 729 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 RCOR3Q9P2K3 495 aaPredicted RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 ADAM28Q9UKQ2 775 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 GPR179Q6PRD1 2367 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 VWA8A3KMH1 1905 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 NUP205Q92621 2012 aa3.71□□□□□ -1.82
MDM2-220ENST00000496959 ZNF638Q14966 1978 aaKnown RBP3.71□□□□□ -1.82
MDM2-220ENST00000496959 TRIOO75962 3097 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 SAP18O00422 153 aaKnown RBP3.7□□□□□ -1.82
MDM2-220ENST00000496959 SYT7O43581 403 aa3.7□□□□□ -1.82
MDM2-220ENST00000496959 N4BP1O75113 896 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms