RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	C1orf52	Q8N6N3	182 aa	Known RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	OR10D3	Q8NH80	312 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	UHMK1	Q8TAS1	419 aa	Known RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	DUSP19	Q8WTR2	217 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	SLC9A6	Q92581	669 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	TM4SF18	Q96CE8	201 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	MTBP	Q96DY7	904 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	GMPPA	Q96IJ6	420 aa	Predicted RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF681	Q96N22	645 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	NSUN5	Q96P11	429 aa	Known RBP	6.99	□□□□□ -1.29
NVL-223	ENST00000496393	NPAS1	Q99742	590 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	RHNO1	Q9BSD3	238 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	DPH5	Q9H2P9	285 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ALG2	Q9H553	416 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ELOVL6	Q9H5J4	265 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	PTGES2	Q9H7Z7	377 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	MANSC1	Q9H8J5	431 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CHODL	Q9H9P2	273 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	AHSP	Q9NZD4	102 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	SENP1	Q9P0U3	644 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	ADAM29	Q9UKF5	820 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	GPR52	Q9Y2T5	361 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393	CAD	P27708	2225 aa		6.99	□□□□□ -1.29
NVL-223	ENST00000496393		A0A096LNT2	108 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	UBFD1	O14562	309 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	TNFSF11	O14788	317 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	FADS1	O60427	444 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	RAMP1	O60894	148 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	SYNGR4	O95473	234 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	PDYN	P01213	254 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	CD8A	P01732	235 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	C2	P06681	752 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	IL3	P08700	152 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	TSPAN8	P19075	237 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	PSMB1	P20618	241 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	CRABP2	P29373	138 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	AGTR1	P30556	359 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	C21orf58	P58505	322 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	MRPS22	P82650	360 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	ILF2	Q12905	390 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	GANAB	Q14697	944 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	TCHHL1	Q5QJ38	904 aa	Predicted RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	GRTP1	Q5TC63	336 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	MFSD12	Q6NUT3	480 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	FIGNL1	Q6PIW4	674 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	BEND4	Q6ZU67	534 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	C3orf62	Q6ZUJ4	267 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	GALNT10	Q86SR1	603 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	LRRC8A	Q8IWT6	810 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	GATS	Q8NAP1	163 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	STEAP2	Q8NFT2	490 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	OR7G2	Q8NG99	324 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	OR4F6	Q8NGB9	312 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF675	Q8TD23	568 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	SELENOM	Q8WWX9	145 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	EDARADD	Q8WWZ3	215 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	ROBO4	Q8WZ75	1007 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	PHF21B	Q96EK2	531 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	TRAF4	Q9BUZ4	470 aa	Predicted RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	FAIM2	Q9BWQ8	316 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	SHARPIN	Q9H0F6	387 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	ESRP2	Q9H6T0	727 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	FANCF	Q9NPI8	374 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	RRAGD	Q9NQL2	400 aa	Predicted RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	FBXO34	Q9NWN3	711 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	XPR1	Q9UBH6	696 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	PSME2	Q9UL46	239 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	MCTS1	Q9ULC4	181 aa	Known RBP	6.98	□□□□□ -1.29
NVL-223	ENST00000496393	ACOT9	Q9Y305	439 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393	AP4B1	Q9Y6B7	739 aa		6.98	□□□□□ -1.29
NVL-223	ENST00000496393		A0A096LPK6	155 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	DPRX	A6NFQ7	191 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	LINC01387	J3KSC0	135 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	PPP6C	O00743	305 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	NDUFB5	O43674	189 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	GCM2	O75603	506 aa	Predicted RBP	6.97	□□□□□ -1.29
NVL-223	ENST00000496393	BCAS2	O75934	225 aa	Predicted RBP	6.97	□□□□□ -1.29
NVL-223	ENST00000496393	TUBB	P07437	444 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	SRD5A1	P18405	259 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	IGFBP5	P24593	272 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	MAP2K3	P46734	347 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	CDH11	P55287	796 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	IRX1	P78414	480 aa	Predicted RBP	6.97	□□□□□ -1.29
NVL-223	ENST00000496393	PSG6	Q00889	435 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	STK11	Q15831	433 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	UAP1	Q16222	522 aa	Predicted RBP	6.97	□□□□□ -1.29
NVL-223	ENST00000496393	FAM83E	Q2M2I3	478 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	TMEM44	Q2T9K0	475 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	MROH9	Q5TGP6	573 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	LETMD1	Q6P1Q0	360 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	CLEC2A	Q6UVW9	174 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	TMEM107	Q6UX40	140 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	SEZ6L2	Q6UXD5	910 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	LINC00114	Q6XXX2	140 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	NUFIP2	Q7Z417	695 aa	Known RBP	6.97	□□□□□ -1.29
NVL-223	ENST00000496393	MILR1	Q7Z6M3	343 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	CCDC25	Q86WR0	208 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	FAM9C	Q8IZT9	166 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	GABRG1	Q8N1C3	465 aa		6.97	□□□□□ -1.29
NVL-223	ENST00000496393	ZNF525	Q8N782	197 aa		6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms