RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 CYTH4Q9UIA0 394 aa4.26□□□□□ -1.73
SRRM1-218ENST00000494934 HPCAL4Q9UM19 191 aa4.26□□□□□ -1.73
SRRM1-218ENST00000494934 NTNG1Q9Y2I2 539 aa4.26□□□□□ -1.73
SRRM1-218ENST00000494934 USP16Q9Y5T5 823 aa4.26□□□□□ -1.73
SRRM1-218ENST00000494934 C15orf38-AP3S2A0A0A6YYH1 394 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 TRBV7-9A0A0J9YWB2 115 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 A0A1W2PPR1 153 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 KRTAP16-1A8MUX0 517 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 LRRTM2O43300 516 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
SRRM1-218ENST00000494934 OPN1MWP04001 364 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 ALPIP09923 528 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 OPN1MW2P0DN77 364 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 OPN1MW3P0DN78 364 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 PVRP15151 417 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 IDSP22304 550 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 LIM2P55344 173 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 FCHO2Q0JRZ9 810 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 PTCH1Q13635 1447 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 LTB4RQ15722 352 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 NHLRC3Q5JS37 347 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 GFI1BQ5VTD9 330 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 PMF1Q6P1K2 205 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 PAQR6Q6TCH4 344 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 CCBE1Q6UXH8 406 aaPredicted RBP4.25□□□□□ -1.73
SRRM1-218ENST00000494934 GPRIN3Q6ZVF9 776 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 SLC38A6Q8IZM9 456 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 OR5L2Q8NGL0 311 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 OR6T1Q8NGN1 323 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 ITLN1Q8WWA0 313 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 RLN3Q8WXF3 142 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF599Q96NL3 588 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 RIT2Q99578 217 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 TM2D1Q9BX74 207 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 VCX2Q9H322 139 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 HEXA-AS1Q9H8Q6 139 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 AMBNQ9NP70 447 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 MRPL39Q9NYK5 338 aaKnown RBP4.25□□□□□ -1.73
SRRM1-218ENST00000494934 ARMCX1Q9P291 453 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 BARX2Q9UMQ3 279 aaPredicted RBP4.25□□□□□ -1.73
SRRM1-218ENST00000494934 CLEC4AQ9UMR7 237 aa4.25□□□□□ -1.73
SRRM1-218ENST00000494934 MRPL11Q9Y3B7 192 aaKnown RBP4.25□□□□□ -1.73
SRRM1-218ENST00000494934 METTL21EPA6NDL7 271 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 BTN3A3O00478 584 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 PRRG1O14668 218 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 RAMP1O60894 148 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 SURF6O75683 361 aaKnown RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 SDC1P18827 310 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 HPCAL1P37235 193 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 OR1D4P47884 311 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 RPL8P62917 257 aaKnown RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 RIPK1Q13546 671 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 DPYSL3Q14195 570 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 ELAVL3Q14576 367 aaKnown RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 ABRAXAS2Q15018 415 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 SYPL1Q16563 259 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 TATDN3Q17R31 274 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF57Q68EA5 555 aaPredicted RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 SLC47A2Q86VL8 602 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 LRRC49Q8IUZ0 686 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 BPIFB2Q8N4F0 458 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 EIF1ADQ8N9N8 165 aaKnown RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 EMG1Q92979 244 aaKnown RBP4.24□□□□□ -1.73
SRRM1-218ENST00000494934 PELI1Q96FA3 418 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 AMDHD1Q96NU7 426 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 VGLL1Q99990 258 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 FEM1AQ9BSK4 669 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 RAI14Q9P0K7 980 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 GALPQ9UBC7 116 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 PRODH2Q9UF12 536 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 SLC2A6Q9UGQ3 507 aa4.24□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF840PA6NDX5 716 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF487B1APH4 448 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SAP18O00422 153 aaKnown RBP4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SRPX2O60687 465 aaPredicted RBP4.23□□□□□ -1.73
SRRM1-218ENST00000494934 RHOBTB1O94844 696 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SNX4O95219 450 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 ADCY5O95622 1261 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 IL1BP01584 269 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 UMPSP11172 480 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 BCKDHAP12694 445 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 H2AFXP16104 143 aaPredicted RBP4.23□□□□□ -1.73
SRRM1-218ENST00000494934 LAP3P28838 519 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 NTHL1P78549 312 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 RGS1Q08116 209 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 IL18R1Q13478 541 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 MRGPRG-AS1Q2M3A8 158 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 TIGITQ495A1 244 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 CEACAM19Q7Z692 300 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF683Q8IZ20 524 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 TMEM123Q8N131 208 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SLC22A18ASQ8N1D0 253 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 C17orf47Q8NEP4 570 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 OR2T33Q8NG76 320 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 ADAMTS16Q8TE57 1224 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 ZNF689Q96CS4 500 aaPredicted RBP4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SLC41A3Q96GZ6 507 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 C12orf66Q96MD2 445 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 OMDQ99983 421 aa4.23□□□□□ -1.73
SRRM1-218ENST00000494934 SLC30A2Q9BRI3 323 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms