RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 ACTRT2Q8TDY3 377 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 EGLN2Q96KS0 407 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 FCRL1Q96LA6 429 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 UBQLN4Q9NRR5 601 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
COL6A1-205ENST00000492851 MKS1Q9NXB0 559 aa11.24□□□□□ -0.61
COL6A1-205ENST00000492851 SMIM23A6NLE4 172 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 ALG1L2C9J202 215 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 H3BML4 177 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 ALOX5P09917 674 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF17P17021 662 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 TCEA1P23193 301 aaKnown RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 SERPINB5P36952 375 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 MAP3K8P41279 467 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 FRKP42685 505 aaPredicted RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PRIM2P49643 509 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PDE7AQ13946 482 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 RFTN2Q52LD8 501 aaPredicted RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 KANK2Q63ZY3 851 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 GTF2IRD2BQ6EKJ0 949 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 FAM214BQ7L5A3 538 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 GTF2IRD2Q86UP8 949 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 C4orf33Q8N1A6 199 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 METTL25Q8N6Q8 603 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 FAM110BQ8TC76 370 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 SLC9A6Q92581 669 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PIGTQ969N2 578 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 ZBTB8AQ96BR9 441 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF845Q96IR2 970 aaPredicted RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PPP3R2Q96LZ3 170 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 MS4A4EQ96PG1 132 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 FAM111AQ96PZ2 611 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PRPF18Q99633 342 aaKnown RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 GATA5Q9BWX5 397 aaPredicted RBP11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PINK1Q9BXM7 581 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 HOXD1Q9GZZ0 328 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 GLRX2Q9NS18 164 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 TRAF6Q9Y4K3 522 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 DNAJC15Q9Y5T4 150 aa11.23□□□□□ -0.61
COL6A1-205ENST00000492851 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 TLDC2A0PJX2 215 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 C7orf72A4D263 438 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 C16orf97H3BN30 126 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SCDO00767 359 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 LSM1O15116 133 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SEC14L5O43304 696 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ARHGEF9O43307 516 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 LYPLA1O75608 230 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 KRT16P08779 473 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 LINC00032P0C843 101 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 POU2F1P14859 743 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SDC1P18827 310 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 FPR1P21462 350 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 HPCAL1P37235 193 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 KIR2DL2P43627 348 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 KCNJ5P48544 419 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SUCLG1P53597 346 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 CLDN15P56746 228 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ADAM8P78325 824 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 FAM27E3Q08E93 113 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 PON3Q15166 354 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 TMEM44Q2T9K0 475 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 GRAMD1BQ3KR37 738 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 PDSS1Q5T2R2 415 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 CPTPQ5TA50 214 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SHEQ5VZ18 495 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 SZRD1Q7Z422 152 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ANKHD1Q8IWZ3 2542 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 DDIASQ8IXT1 998 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 GSPT2Q8IYD1 628 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 EXPH5Q8NEV8 1989 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 EPS8L3Q8TE67 593 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 PIK3R3Q92569 461 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 APOPT1Q96IL0 206 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 TSSK3Q96PN8 268 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 STACQ99469 402 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 MED18Q9BUE0 208 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ROPN1BQ9BZX4 212 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ROPN1Q9HAT0 212 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 TNFRSF12AQ9NP84 129 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 EQTNQ9NQ60 294 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 ATAD3AQ9NVI7 634 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 MCTS1Q9ULC4 181 aaKnown RBP11.22□□□□□ -0.61
COL6A1-205ENST00000492851 PROCRQ9UNN8 238 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 EMC9Q9Y3B6 208 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 TESMINQ9Y4I5 508 aa11.22□□□□□ -0.61
COL6A1-205ENST00000492851 A0A1W2PQD3 144 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 GXYLT2A0PJZ3 443 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 B4DXG7 233 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 H3BNH8 94 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 CTIFO43310 598 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 AKAP10O43572 662 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 KCNK2O95069 426 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms