RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ERVK-11Q9UQG0 969 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 UGT2A1Q9Y4X1 527 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SPENQ96T58 3664 aaKnown RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 A0A1W2PQ72 361 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 EVPLLA8MZ36 301 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 B4GALT2O60909 372 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 KRT6AP02538 564 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 KRT6BP04259 564 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SFTPCP11686 197 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 BCKDHAP12694 445 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 EFNA1P20827 205 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 KRT6CP48668 564 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CLDN8P56748 225 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SOX8P57073 446 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SELENBP1Q13228 472 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 NDUFA5Q16718 116 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SGO1Q5FBB7 561 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 KHDRBS2Q5VWX1 349 aaKnown RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 TCTN3Q6NUS6 607 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 TRIM40Q6P9F5 258 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CCDC80Q76M96 950 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ANKRD37Q7Z713 158 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SERPINA11Q86U17 422 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 AKAP14Q86UN6 197 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 GALNT16Q8N428 558 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 PLPP5Q8NEB5 264 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 UBE2E3Q969T4 207 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 OR1F2PQ96R84 312 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 BTBD2Q9BX70 525 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 DCSTAMPQ9H295 470 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF552Q9H707 407 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ZBTB20Q9HC78 741 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SERHLQ9NQF3 203 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 POLE4Q9NR33 117 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 ABCB10Q9NRK6 738 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 KRT84Q9NSB2 600 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 SLC6A13Q9NSD5 602 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 VNN3Q9NY84 501 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 RPS6KA6Q9UK32 745 aa8.75□□□□□ -1.01
BRCA1-219ENST00000491747 PCDHGA9Q9Y5G4 932 aaKnown RBP8.75□□□□□ -1.01
BRCA1-219ENST00000491747 CPAMD8Q8IZJ3 1885 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 TGFBR3LH3BV60 316 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 MANBAO00462 879 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 RFXANKO14593 260 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 HPP00738 406 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 FABP3P05413 133 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 C8orf89P0DMQ9 161 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 PRPS2P11908 318 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 UGT2B10P36537 528 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 PIK3CBP42338 1070 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 LIM2P55344 173 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 AIMP2Q13155 320 aaKnown RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 KRR1Q13601 381 aaKnown RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 LAPTM4AQ15012 233 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 UBE2UQ5VVX9 321 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ASB18Q6ZVZ8 466 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 NDUFAF7Q7L592 441 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 LYSMD2Q8IV50 215 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 P3H2Q8IVL5 708 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ATG16L2Q8NAA4 619 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 CLEC1AQ8NC01 280 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 OR10Q1Q8NGQ4 319 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 CLHC1Q8NHS4 586 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 SLC38A4Q969I6 547 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 CMTM7Q96FZ5 175 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 SERINC2Q96SA4 455 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 WDR77Q9BQA1 342 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF717Q9BY31 904 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ALOXE3Q9BYJ1 711 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 SLC29A3Q9BZD2 475 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF700Q9H0M5 742 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 REEP1Q9H902 201 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 MOV10Q9HCE1 1003 aaKnown RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 PDP1Q9P0J1 537 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 KCMF1Q9P0J7 381 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 ABCG2Q9UNQ0 655 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 SAMHD1Q9Y3Z3 626 aaKnown RBP8.74□□□□□ -1.01
BRCA1-219ENST00000491747 CLDN16Q9Y5I7 305 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 A3GALT2U3KPV4 340 aa8.74□□□□□ -1.01
BRCA1-219ENST00000491747 PLPP1O14494 284 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ASNA1O43681 348 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 AIREO43918 545 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 PTTG1O95997 202 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 RNH1P13489 461 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 MAOAP21397 527 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ATP5A1P25705 553 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 MAPK1P28482 360 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 KRT20P35900 424 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 TGFBR2P37173 567 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 PHC1P78364 1004 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 SLC13A2Q13183 592 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 SMN1Q16637 294 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ERICH5Q6P6B1 374 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 AHSA2Q719I0 299 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 CPEB2Q7Z5Q1 589 aaKnown RBP8.73□□□□□ -1.01
BRCA1-219ENST00000491747 C10orf111Q8N326 155 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 ACOT4Q8N9L9 421 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 POC5Q8NA72 575 aa8.73□□□□□ -1.01
BRCA1-219ENST00000491747 HTRA1Q92743 480 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms