RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MAGEA12P43365 314 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 SRSF2Q01130 221 aaKnown RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 FAPQ12884 760 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 ZNF155Q12901 538 aaPredicted RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 TAB1Q15750 504 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 CYP27C1Q4G0S4 372 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 SH2D4BQ5SQS7 431 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 C6orf52Q5T4I8 152 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 PPP4R4Q6NUP7 873 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 BEND4Q6ZU67 534 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 CCDC25Q86WR0 208 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 GABRG1Q8N1C3 465 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 TMEM151AQ8N4L1 468 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 GFM2Q969S9 779 aaKnown RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 C11orf24Q96F05 449 aaPredicted RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 TRMT61AQ96FX7 289 aaKnown RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 TRAF4Q9BUZ4 470 aaPredicted RBP11.78□□□□□ -0.52
USF1-206ENST00000491629 TRIM2Q9C040 744 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 C12orf49Q9H741 205 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 SLC35C2Q9NQQ7 365 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 XPR1Q9UBH6 696 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 VPS29Q9UBQ0 182 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 VDAC3Q9Y277 283 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
USF1-206ENST00000491629 DPRXA6NFQ7 191 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 MYO1GB0I1T2 1018 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 MANBAO00462 879 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 CLOCKO15516 846 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 RAMP1O60894 148 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 ESRRBO95718 433 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 IL33O95760 270 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 FAM157CP0CG43 387 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 PTNP21246 168 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 TYK2P29597 1187 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 HTR6P50406 440 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 PLTPP55058 493 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 CTBP2P56545 445 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 PSPHP78330 225 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 MRPS22P82650 360 aaKnown RBP11.77□□□□□ -0.53
USF1-206ENST00000491629 CALCOCO2Q13137 446 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 GRAMD1BQ3KR37 738 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 KLC3Q6P597 504 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 FIGNL1Q6PIW4 674 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 DNAJC14Q6Y2X3 702 aaPredicted RBP11.77□□□□□ -0.53
USF1-206ENST00000491629 NUFIP2Q7Z417 695 aaKnown RBP11.77□□□□□ -0.53
USF1-206ENST00000491629 ZNF619Q8N2I2 560 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 POC1BQ8TC44 478 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 C16orf78Q8WTQ4 265 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 APIPQ96GX9 242 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 VPS11Q9H270 941 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 TAS2R9Q9NYW1 312 aa11.77□□□□□ -0.53
USF1-206ENST00000491629 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
USF1-206ENST00000491629 C19orf53Q9UNZ5 99 aaPredicted RBP11.77□□□□□ -0.53
USF1-206ENST00000491629 GXYLT2A0PJZ3 443 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 FAM187AA6NFU0 413 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 UPK1AO00322 258 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 TNFSF11O14788 317 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 PCDH7O60245 1069 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 UTS2O95399 124 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 ANGPTL1O95841 491 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 PLGP00747 810 aaPredicted RBP11.76□□□□□ -0.53
USF1-206ENST00000491629 CD3EP07766 207 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 SHC1P29353 583 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 PRR5P85299 388 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 CSTF3Q12996 717 aaKnown RBP11.76□□□□□ -0.53
USF1-206ENST00000491629 TMEM107Q6UX40 140 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 FAM9CQ8IZT9 166 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 GTPBP8Q8N3Z3 284 aaPredicted RBP11.76□□□□□ -0.53
USF1-206ENST00000491629 OR10H5Q8NGA6 315 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 ROBO4Q8WZ75 1007 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 SLC9A6Q92581 669 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 GTPBP3Q969Y2 492 aaKnown RBP11.76□□□□□ -0.53
USF1-206ENST00000491629 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 PRRG4Q9BZD6 226 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 ACPTQ9BZG2 426 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 SDHAF3Q9NRP4 125 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 FBXO34Q9NWN3 711 aa11.76□□□□□ -0.53
USF1-206ENST00000491629 A0A087WV62 115 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 A0A1W2PP18 115 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 A8MT66 165 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 SHISA9B4DS77 424 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 ZSCAN12O43309 604 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 EFNA2O43921 213 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 OTCP00480 354 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
USF1-206ENST00000491629 ADH6P28332 368 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 HSD17B3P37058 310 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 RFX3P48380 749 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 SERPINB8P50452 374 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 C17orf67Q0P5P2 114 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 UAP1Q16222 522 aaPredicted RBP11.75□□□□□ -0.53
USF1-206ENST00000491629 DECR1Q16698 335 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 TMEM249Q2WGJ8 235 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 SFRP5Q5T4F7 317 aa11.75□□□□□ -0.53
USF1-206ENST00000491629 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms