RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TMEM108Q6UXF1 575 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 GLCCI1Q86VQ1 547 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TDRPQ86YL5 185 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 RNF10Q8N5U6 811 aaKnown RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 OR7G1Q8NGA0 311 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 OR52B6Q8NGF0 335 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TMBIM1Q969X1 311 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TMEM186Q96B77 213 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TMCO6Q96DC7 493 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 CCDC42Q96M95 316 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 COL21A1Q96P44 957 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TRMOQ9BU70 441 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TRIM54Q9BYV2 358 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 SAP130Q9H0E3 1048 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 EHD1Q9H4M9 534 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 HIF1ANQ9NWT6 349 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TAS2R13Q9NYV9 303 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 PDP1Q9P0J1 537 aaPredicted RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 PHF11Q9UIL8 331 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 POU2F3Q9UKI9 436 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 FBXO5Q9UKT4 447 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 MCTS1Q9ULC4 181 aaKnown RBP6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 MGAT4BQ9UQ53 548 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 ASB4Q9Y574 426 aa6.22□□□□□ -1.41
PDLIM1-203ENST00000490391 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 LOC105371242A0A075B767 164 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 TCRBV7S3A2A0A539 114 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SDR42E2A6NKP2 422 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 B4DSR2 109 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SAP18O00422 153 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 PGRMC2O15173 223 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ADAMDEC1O15204 470 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CXCL13O43927 109 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 WDR47O94967 919 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SLU7O95391 586 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CBX7O95931 251 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 NR2F6P10588 404 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 EPORP19235 508 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 PGCP20142 388 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 COX5AP20674 150 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 DRD5P21918 477 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 EDNRAP25101 427 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 TLX1P31314 330 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 APOBEC3AP31941 199 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CETN2P41208 172 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CASP2P42575 452 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 IL2P60568 153 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CDKL1Q00532 357 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 RIN1Q13671 783 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 THOC5Q13769 683 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 CCNIQ14094 377 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 DHX34Q14147 1143 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 E2F2Q14209 437 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 GLYR1Q49A26 553 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ARMC3Q5W041 872 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 OR4C11Q6IEV9 310 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SHQ1Q6PI26 577 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 Q6ZT83 130 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 RHOUQ7L0Q8 258 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 SSX8Q7RTT4 187 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ZCCHC7Q8N3Z6 543 aaKnown RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 RNF128Q8TEB7 428 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ABHD3Q8WU67 409 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF669Q96BR6 464 aaPredicted RBP6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 MUCL1Q96DR8 90 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 C1GALT1C1Q96EU7 318 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ADOQ96SZ5 270 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 C1QTNF5Q9BXJ0 243 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 RTN4RQ9BZR6 473 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 GPRC5BQ9NZH0 403 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 MED11Q9P086 117 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 PAK5Q9P286 719 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 KLHL13Q9P2N7 655 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF639Q9UID6 485 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 ACTL7BQ9Y614 415 aa6.21□□□□□ -1.42
PDLIM1-203ENST00000490391 A0A0A6YYD5 115 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 GOLGA6L10A0A0M3HER8 536 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 OR5H1A6NKK0 313 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 SMTNL1A8MU46 457 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 AP3B1O00203 1094 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PLPP1O14494 284 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PIN1P1O15428 100 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 TMPRSS11DO60235 418 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 REM1O75628 298 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 CLDN9O95484 217 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 NUDT17P0C025 328 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 ZNF17P17021 662 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 PPICP45877 212 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 HNMTP50135 292 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 EMDP50402 254 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 IL13RA1P78552 427 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 EXOSC7Q15024 291 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 KHDRBS2Q5VWX1 349 aaKnown RBP6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 FAM111BQ6SJ93 734 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 UGT2A3Q6UWM9 527 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 P2RY8Q86VZ1 359 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 TUSC5Q8IXB3 177 aa6.2□□□□□ -1.42
PDLIM1-203ENST00000490391 LMNTD2Q8IXW0 634 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms