RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 NFATC1O95644 943 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PEX11BO96011 259 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OTCP00480 354 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 IGHV2-5P01817 119 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 IL5P05113 134 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HEXBP07686 556 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CHRM5P08912 532 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ALPIP09923 528 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PRPS2P11908 318 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 BCKDHAP12694 445 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OSMP13725 252 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CBR1P16152 277 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MGMTP16455 207 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PSMB1P20618 241 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 AGAP20933 346 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HTR2AP28223 471 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 VIPR1P32241 457 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 NTF4P34130 210 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CHI3L1P36222 383 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PMELP40967 661 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 LIMS1P48059 325 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MTNR1BP49286 362 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MMP15P51511 669 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CCR6P51684 374 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HCCSP53701 268 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CDH12P55289 794 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 WNT3AP56704 352 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CD81P60033 236 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 WDR5P61964 334 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CXADRP78310 365 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MAT1AQ00266 395 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 TAP2Q03519 686 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ITKQ08881 620 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 FABP9Q0Z7S8 132 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HEPACAMQ14CZ8 416 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 RBMS2Q15434 407 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 IFI44LQ53G44 452 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 FBXO48Q5FWF7 155 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 C12orf73Q69YU5 71 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HBMQ6B0K9 141 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PRR5LQ6MZQ0 368 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PAQR3Q6TCH7 311 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CASP12Q6UXS9 341 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 Q6ZTK2 550 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MARCH9Q86YJ5 346 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ZBTB8OSQ8IWT0 167 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 HDDC3Q8N4P3 179 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ARRDC1Q8N5I2 433 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ARIH2OSQ8N7S6 290 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 C15orf54Q8N8G6 183 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 RTL3Q8N8U3 475 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 BMPERQ8N8U9 685 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 FAM98AQ8NCA5 519 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OR52B6Q8NGF0 335 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OR52I1Q8NGK6 324 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OR52J3Q8NH60 311 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 NEIL3Q8TAT5 605 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 OSTF1Q92882 214 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 VOPP1Q96AW1 172 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 RGMAQ96B86 450 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MTFMTQ96DP5 389 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ZNF354BQ96LW1 612 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 SLC2A13Q96QE2 648 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 MDFIQ99750 246 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 VRK1Q99986 396 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 GGACTQ9BVM4 153 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 COLEC11Q9BWP8 271 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 POLDIP3Q9BY77 421 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 CACYBPQ9HB71 228 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 GPN1Q9HCN4 374 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 FGF20Q9NP95 211 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ZDHHC4Q9NPG8 344 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 PXMP2Q9NR77 195 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 THSD1Q9NS62 852 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ACER3Q9NUN7 267 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 ZSCAN32Q9NX65 697 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 TEX10Q9NXF1 929 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 TAS2R5Q9NYW4 299 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 DNAJC27Q9NZQ0 273 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 NFKBIL1Q9UBC1 381 aaPredicted RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 EIF2B4Q9UI10 523 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 YARS2Q9Y2Z4 477 aaKnown RBP4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 NUP205Q92621 2012 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 DSPPQ9NZW4 1301 aa4.47□□□□□ -1.69
SNRNP40-206ENST00000489853 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 A0A0D9SG52 128 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 NCF1BA6NI72 391 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 NCF1CA8MVU1 366 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 HEPACAM2A8MVW5 462 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 GFYI3L273 518 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 OR7A17O14581 309 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 FPGTO14772 594 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ARPC5O15511 151 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 OIP5O43482 229 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 EIF4E2O60573 245 aaKnown RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 PEX10O60683 326 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 ULK1O75385 1050 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 RGS9O75916 674 aaPredicted RBP4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 NCR1O76036 304 aa4.46□□□□□ -1.69
SNRNP40-206ENST00000489853 UBL3O95164 117 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms