RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PLLPQ9Y342 182 aa10.09□□□□□ -0.79
HDAC6-233ENST00000489352 A0A1W2PR80 420 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 A0A1W2PS29 197 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 B4DXG7 233 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 B9A039 149 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 PGRMC2O15173 223 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 LIASO43766 372 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 SHOX2O60902 331 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 EEDO75530 441 aaKnown RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 RAD51DO75771 328 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 PGM3O95394 542 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 CLDN9O95484 217 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 TPM1P09493 284 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 ZSCAN5DPP0CG00 497 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 CPMP14384 443 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 ANPEPP15144 967 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 S1PR1P21453 382 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 MDKP21741 143 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 SERPINB1P30740 379 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 IDH3GP51553 393 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 CDKL1Q00532 357 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 POU4F1Q01851 419 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 IRF8Q02556 426 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 DDX39BQ13838 428 aaKnown RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 DOC2BQ14184 412 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 C18orf21Q32NC0 220 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 HSP90AA5PQ58FG0 334 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 SH2D4BQ5SQS7 431 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF100Q8IYN0 542 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF786Q8N393 782 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 UBL4BQ8N7F7 174 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 OR52R1Q8NGF1 315 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 RNF128Q8TEB7 428 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 UBASH3BQ8TF42 649 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 EFHD2Q96C19 240 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 BPIFA3Q9BQP9 254 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 GP6Q9HCN6 339 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 IARS2Q9NSE4 1012 aaKnown RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 ACSS1Q9NUB1 689 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-233ENST00000489352 NTMQ9P121 344 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 PRSS50Q9UI38 385 aa10.08□□□□□ -0.8
HDAC6-233ENST00000489352 EPPK1P58107 5090 aaKnown RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 LOC100653049A0A140TA62 436 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 GOLGA6L10A6NI86 522 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 ADAMDEC1O15204 470 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TSPAN2O60636 221 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 KRT34O76011 436 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 PRSS23O95084 383 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TFP02787 698 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 IGHV1-2P23083 117 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 CASP2P42575 452 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 OR3A2P47893 321 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 KHKP50053 298 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TERF1P54274 439 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 RAB10P61026 200 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 RAC1P63000 192 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 PSPHP78330 225 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 CDK16Q00536 496 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 SRSF4Q08170 494 aaKnown RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 BAMBIQ13145 260 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 SNX1Q13596 522 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 RBM20Q5T481 1227 aaKnown RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 MED27Q6P2C8 311 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 LEG1Q6P5S2 330 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 FAM111BQ6SJ93 734 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 C1orf229Q6ZS94 237 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 GSTA5Q7RTV2 222 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 UBE2J2Q8N2K1 259 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 SIGLECL1Q8N7X8 197 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 CDYL2Q8N8U2 506 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 CPNE4Q96A23 557 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 ADGRG7Q96K78 797 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 RBM4BQ9BQ04 359 aaKnown RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 KCNS3Q9BQ31 491 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 FRMD8P1Q9BZ68 369 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TMEM185BQ9H7F4 350 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TAS2R16Q9NYV7 291 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 OR10H1Q9Y4A9 318 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 TRAF6Q9Y4K3 522 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 OARD1Q9Y530 152 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 ASB4Q9Y574 426 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 BIRC6Q9NR09 4857 aa10.07□□□□□ -0.8
HDAC6-233ENST00000489352 A0A0G2JMP0 313 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 A0A0J9YW62 118 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 A0A0X1KG70 313 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 TCRBV7S2A1N4TA0A589 114 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 NPEPPSL1A6NEC2 478 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 ATP6V1G2-DDX39BF2Z307 99 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PLPP1O14494 284 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PHGDHO43175 533 aaKnown RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
HDAC6-233ENST00000489352 MTHFD2P13995 350 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF17P17021 662 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 ADRA2CP18825 462 aa10.06□□□□□ -0.8
HDAC6-233ENST00000489352 PCGF2P35227 344 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms