RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 IDO1P14902 403 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 MATN1P21941 496 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 DCTP40126 519 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 GAS1P54826 345 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 NME5P56597 212 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 LRRC74AQ0VAA2 488 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 RCAN2Q14206 197 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
BRCA1-218ENST00000489037 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRCA1-218ENST00000489037 GRAMD1BQ3KR37 738 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 MARCH3Q86UD3 253 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 CLECL1Q8IZS7 167 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 MARVELD2Q8N4S9 558 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 GLB1L3Q8NCI6 653 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-218ENST00000489037 OR5AK3PQ8NH89 298 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 FAM110BQ8TC76 370 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 ACTRT2Q8TDY3 377 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 DUSP19Q8WTR2 217 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 CDS1Q92903 461 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
BRCA1-218ENST00000489037 C7orf26Q96N11 449 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 SFXN2Q96NB2 322 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 HOXD1Q9GZZ0 328 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 UBQLN4Q9NRR5 601 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 INTS9Q9NV88 658 aaKnown RBP12.99□□□□□ -0.33
BRCA1-218ENST00000489037 FLRT3Q9NZU0 649 aa12.99□□□□□ -0.33
BRCA1-218ENST00000489037 RNF103-CHMP3A0A140T963 221 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 HNRNPRO43390 633 aaKnown RBP12.98□□□□□ -0.33
BRCA1-218ENST00000489037 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 OXSR1O95747 527 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-218ENST00000489037 AGR2O95994 175 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 IGKV1D-16P01601 117 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 NGFRP08138 427 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 ALDOCP09972 364 aaKnown RBP12.98□□□□□ -0.33
BRCA1-218ENST00000489037 GLI4P10075 376 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 HK1P19367 917 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 TBXA2RP21731 343 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 UQCRC2P22695 453 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 ZFP36L2P47974 494 aaKnown RBP12.98□□□□□ -0.33
BRCA1-218ENST00000489037 UFM1P61960 85 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 GSTA3Q16772 222 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 FAM174BQ3ZCQ3 159 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 SPANXN4Q5MJ08 99 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 CHMP1BQ7LBR1 199 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 C6orf120Q7Z4R8 191 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 GALNT10Q86SR1 603 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 ANKRD46Q86W74 232 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 RPRMLQ8N4K4 120 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 TRIML2Q8N7C3 387 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 ZNF527Q8NB42 609 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 LILRB4Q8NHJ6 448 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 PRDM14Q9GZV8 571 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 KCNJ16Q9NPI9 418 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 EXD2Q9NVH0 621 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 GPATCH2Q9NW75 528 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 MED11Q9P086 117 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
BRCA1-218ENST00000489037 FAM215AQ9Y5M1 114 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 USH1CQ9Y6N9 552 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 DOCK7Q96N67 2140 aa12.98□□□□□ -0.33
BRCA1-218ENST00000489037 HSPB2A8KAH6 182 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 ALG1L2C9J202 215 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 H0Y3Z8 333 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 H3BNH8 94 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 LINC01387J3KSC0 135 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 ANKRD28O15084 1053 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 UBDO15205 165 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 EPPINO95925 133 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 AK1P00568 194 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 IL2RAP01589 272 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 COX6B1P14854 86 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
BRCA1-218ENST00000489037 CHMP24386 653 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 MSX1P28360 303 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 CHI3L1P36222 383 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-218ENST00000489037 WNT3P56703 355 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 HSPB2Q16082 182 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 SLC9B1Q4ZJI4 515 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 DCST2Q5T1A1 773 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 CCNJQ5T5M9 372 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 ATAD3BQ5T9A4 648 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 ZNF787Q6DD87 383 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 LACC1Q8IV20 430 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 CCDC71Q8IV32 467 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-218ENST00000489037 FADS6Q8N9I5 356 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 GOT1L1Q8NHS2 421 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-218ENST00000489037 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 MAELQ96JY0 434 aaKnown RBP12.97□□□□□ -0.33
BRCA1-218ENST00000489037 OR7D2Q96RA2 312 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 OR52E6Q96RD3 313 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 STOML1Q9UBI4 398 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 BTNL2Q9UIR0 455 aa12.97□□□□□ -0.33
BRCA1-218ENST00000489037 GPR45Q9Y5Y3 372 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms