RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 PM20D2Q8IYS1 436 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 OR52N2Q8NGI0 321 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 NEIL3Q8TAT5 605 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 FAM57AQ8TBR7 257 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 OTUB1Q96FW1 271 aaPredicted RBP13.36□□□□□ -0.27
LIMS3-205ENST00000487150 GNRHR2Q96P88 292 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
LIMS3-205ENST00000487150 DEFB127Q9H1M4 99 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 TPT1P8Q9HAU6 139 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 P2RX2Q9UBL9 471 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 NDUFAF1Q9Y375 327 aa13.36□□□□□ -0.27
LIMS3-205ENST00000487150 RP1L1Q8IWN7 2480 aaPredicted RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 IGLV3-32A0A0A0MS00 114 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 TRGV8A0A0C4DH27 118 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 A0A1B0GTH9 108 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 AGFG2O95081 481 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 ANGPTL1O95841 491 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 ACTL6AO96019 429 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 IGKV1D-16P01601 117 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 SNRPB2P08579 225 aaKnown RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 HOXD4P09016 255 aaPredicted RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 LSP1P33241 339 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 PTGER4P35408 488 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 CDKN2CP42773 168 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 GAS1P54826 345 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 SUMO3P55854 103 aaPredicted RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 DSCR4P56555 118 aaPredicted RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 EIF2S3LQ2VIR3 472 aaKnown RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 COQ5Q5HYK3 327 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 LRIF1Q5T3J3 769 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 WLSQ5T9L3 541 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 FNDC7Q5VTL7 733 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 FUNDC1Q8IVP5 155 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 RELTQ969Z4 430 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 SDF2Q99470 211 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 OR2B2Q9GZK3 357 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 TP63Q9H3D4 680 aaPredicted RBP13.35□□□□□ -0.27
LIMS3-205ENST00000487150 STOML1Q9UBI4 398 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 WDR45Q9Y484 360 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 GMEB1Q9Y692 573 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 CROCCQ5TZA2 2017 aa13.35□□□□□ -0.27
LIMS3-205ENST00000487150 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 A0A087WZY1 265 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 C15orf38-AP3S2A0A0A6YYH1 394 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 GMNCA6NCL1 334 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 PYCARD-AS1I3L0S3 204 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 KIAA0513O60268 411 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 PDE9AO76083 593 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 GSNP06396 782 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 TPOP07202 933 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 RFPL3SP0C7P2 107 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 NR2F1P10589 423 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 GABRA1P14867 456 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 CAPN3P20807 821 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 CRATP43155 626 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 STX5Q13190 355 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 NHSL2Q5HYW2 709 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 DESI1Q6ICB0 168 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 CGB2Q6NT52 195 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 SLC2A7Q6PXP3 512 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 ENPP6Q6UWR7 440 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 IFNEQ86WN2 208 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 CLEC4FQ8N1N0 589 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 DPP10Q8N608 796 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 FADS6Q8N9I5 356 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 WDSUB1Q8N9V3 476 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 TOR1AIP2Q8NFQ8 470 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 OR14L1PQ8NHC6 308 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 C10orf82Q8WW14 230 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 ROPN1LQ96C74 230 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 SERHL2Q9H4I8 314 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 TAS2R10Q9NYW0 307 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.34□□□□□ -0.27
LIMS3-205ENST00000487150 ACAD8Q9UKU7 415 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 CAPN7Q9Y6W3 813 aa13.34□□□□□ -0.27
LIMS3-205ENST00000487150 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
LIMS3-205ENST00000487150 E9PLN8 166 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 CLIC1O00299 241 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 HMGN4O00479 90 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 WDR1O75083 606 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 NPPAP01160 153 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 ESRRAP11474 423 aaPredicted RBP13.33□□□□□ -0.28
LIMS3-205ENST00000487150 DPP4P27487 766 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 ZNF41P51814 821 aaPredicted RBP13.33□□□□□ -0.28
LIMS3-205ENST00000487150 CRISP3P54108 245 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 DSTNP60981 165 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 GNGT1P63211 74 aa13.33□□□□□ -0.28
LIMS3-205ENST00000487150 HSF1Q00613 529 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms