RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TACC2O95359 2948 aa9.12□□□□□ -0.95
CPSF4-213ENST00000484112 NF1P21359 2839 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 DUXAA6NLW8 204 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 HSPB2A8KAH6 182 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 E9PBE3 544 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 SYT5O00445 386 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 RRP9O43818 475 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 SUSD5O60279 629 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 HCN1O60741 890 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 TRIM3O75382 744 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 REM1O75628 298 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 NKX2-2O95096 273 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 IL33O95760 270 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 RAF1P04049 648 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 IL6P05231 212 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 KITP10721 976 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 GABRA1P14867 456 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ENDOUP21128 410 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 EPHA3P29320 983 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ADSLP30566 484 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 PEX19P40855 299 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 MAGEA8P43361 318 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 CLK3P49761 638 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 WNT3P56703 355 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 CORO7P57737 925 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 HSPB2Q16082 182 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 FLYWCH1Q4VC44 716 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 EXOSC6Q5RKV6 272 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 MFSD12Q6NUT3 480 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 NPSR1Q6W5P4 371 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 MSANTD1Q6ZTZ1 278 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 KRTCAP2Q8N6L1 136 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 SIMC1Q8NDZ2 872 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 TMBIM1Q969X1 311 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 FAM120BQ96EK7 910 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 GIMAP5Q96F15 307 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 LRRC46Q96FV0 321 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 PPP1R36Q96LQ0 422 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 JSRP1Q96MG2 331 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 G6PC3Q9BUM1 346 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 WDR55Q9H6Y2 383 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 METTL7AQ9H8H3 244 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 PROK2Q9HC23 129 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 SDR39U1Q9NRG7 319 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ZCCHC3Q9NUD5 404 aaKnown RBP9.11□□□□□ -0.95
CPSF4-213ENST00000484112 MRGBPQ9NV56 204 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ZNF446Q9NWS9 450 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 FAM53CQ9NYF3 392 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ZIM2Q9NZV7 527 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 BTNL2Q9UIR0 455 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 GPR45Q9Y5Y3 372 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 ABCA4P78363 2273 aa9.11□□□□□ -0.95
CPSF4-213ENST00000484112 DVL2O14641 736 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 UBDO15205 165 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 POLR3GO15318 223 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 UGT2B11O75310 529 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 AGR2O95994 175 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 AK1P00568 194 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 NGFRP08138 427 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 GUSBP08236 651 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ALOX5P09917 674 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ALDOCP09972 364 aaKnown RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 RFPL3SP0C7P2 107 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 S100A3P33764 101 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 TRPC1P48995 793 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 CCT3P49368 545 aaKnown RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 CDK9P50750 372 aaKnown RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 GAB1Q13480 694 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 TP53BP2Q13625 1128 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 NNATQ16517 81 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 DEFB113Q30KQ7 82 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 PGS1Q32NB8 556 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 SLC9B1Q4ZJI4 515 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 PRAMEF20Q5VT98 475 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 CDC73Q6P1J9 531 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 PAMR1Q6UXH9 720 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 SEM1Q6ZVN7 128 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 TRIML2Q8N7C3 387 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 RELL2Q8NC24 303 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 TNIP2Q8NFZ5 429 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 FAM222BQ8WU58 562 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 OIT3Q8WWZ8 545 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 RNASE6Q93091 150 aaKnown RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 MBD6Q96DN6 1003 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 C18orf12Q96KH6 178 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 RILPQ96NA2 401 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 CCDC115Q96NT0 180 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ADOQ96SZ5 270 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 OSBPL11Q9BXB4 747 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ACTRT3Q9BYD9 372 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 SLC6A15Q9H2J7 730 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 PIGUQ9H490 435 aa9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ZNF703Q9H7S9 590 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-213ENST00000484112 ANKRA2Q9H9E1 313 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms