RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
CLK3-204ENST00000483723 CBLCQ9ULV8 474 aa13□□□□□ -0.33
CLK3-204ENST00000483723 CFL2Q9Y281 166 aa13□□□□□ -0.33
CLK3-204ENST00000483723 PCDHGA6Q9Y5G7 932 aa13□□□□□ -0.33
CLK3-204ENST00000483723 NPIPA5A0A0B4J1W7 369 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NPIPA7E9PJI5 369 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FLRT2O43155 660 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 DYRK3O43781 588 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FMO6PO60774 539 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CCDC159P0C7I6 412 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NPIPA8P0DM63 369 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ATP6V1B1P15313 513 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CDH15P55291 814 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NUP107P57740 925 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 TAS2R41P59536 307 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 DCDP81605 110 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 PLAURQ03405 335 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 COX10Q12887 443 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ILKQ13418 452 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NSDHLQ15738 373 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 PHF19Q5T6S3 580 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 MFSD4BQ5TF39 518 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FOXB2Q5VYV0 432 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OVCH1Q7RTY7 1134 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ZER1Q7Z7L7 766 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 PPP1R3BQ86XI6 285 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 BCORP1Q8N888 145 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ZNF321PQ8N8H1 164 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OR14A16Q8NHC5 309 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 SLC2A12Q8TD20 617 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OIT3Q8WWZ8 545 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 GTPBP3Q969Y2 492 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 ADIPOR1Q96A54 375 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 SLC7A5P2Q9GIP4 190 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ARMC7Q9H6L4 198 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 FTSJ1Q9UET6 329 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 MKL2Q9ULH7 1088 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CLCA3PQ9Y6N3 262 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 A0A087WUU8 490 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 LNP1A1A4G5 178 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 A8MUA0 341 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OR10H3O60404 316 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 THY1P04216 161 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ZGLP1P0C6A0 271 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OSMP13725 252 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 POU2F1P14859 743 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 IFNA8P32881 189 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CSTF2P33240 577 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLK3-204ENST00000483723 NUBP1P53384 320 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CRISP1P54107 249 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ATP12AP54707 1039 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 PSMD4P55036 377 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 ALDH6A1Q02252 535 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 MAD2L1BPQ15013 274 aaPredicted RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 B3GNT8Q7Z7M8 397 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 OR4K5Q8NGD3 323 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 DAZLQ92904 295 aaKnown RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 SLC38A4Q969I6 547 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ART5Q96L15 291 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 NUDT9Q9BW91 350 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 APMAPQ9HDC9 416 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.99□□□□□ -0.33
CLK3-204ENST00000483723 C14orf105Q9NVL8 296 aa12.99□□□□□ -0.33
CLK3-204ENST00000483723 CPSF4LA6NMK7 179 aaKnown RBP12.98□□□□□ -0.33
CLK3-204ENST00000483723 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 LYPD3O95274 346 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 TP53P04637 393 aaPredicted RBP12.98□□□□□ -0.33
CLK3-204ENST00000483723 AGXTP21549 392 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 GPR143P51810 404 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 GABARAPL2P60520 117 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 DCAF7P61962 342 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 HOXC5Q00444 222 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 IL5RAQ01344 420 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 MC2RQ01718 297 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 TEKQ02763 1124 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 DECR1Q16698 335 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 LAIR1Q6GTX8 287 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 Q6ZPB1 254 aaPredicted RBP12.98□□□□□ -0.33
CLK3-204ENST00000483723 GDF7Q7Z4P5 450 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 AGBL5Q8NDL9 886 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 RHBDD1Q8TEB9 315 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 OR8D2Q9GZM6 311 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 SLC26A1Q9H2B4 701 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 CTPS2Q9NRF8 586 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 NTNG1Q9Y2I2 539 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 R4GN57 208 aa12.98□□□□□ -0.33
CLK3-204ENST00000483723 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms