RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 DNAJC14Q6Y2X3 702 aaPredicted RBP19.06■□□□□ 0.64
SEC13-217ENST00000482647 C16orf62Q7Z3J2 963 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 ZAR1Q86SH2 424 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 RNF130Q86XS8 419 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 CHDHQ8NE62 594 aaPredicted RBP19.06■□□□□ 0.64
SEC13-217ENST00000482647 OR4K17Q8NGC6 315 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 FAM57AQ8TBR7 257 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 DUSP19Q8WTR2 217 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 GTF2H4Q92759 462 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 SDF2Q99470 211 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 ZNF385DQ9H6B1 395 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 MRGBPQ9NV56 204 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 KLHL14Q9P2G3 628 aa19.06■□□□□ 0.64
SEC13-217ENST00000482647 BAHCC1Q9P281 2608 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 NINQ8N4C6 2090 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 EML6Q6ZMW3 1958 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 NPIPA2E9PIF3 369 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 NPIPA3F8WFD2 350 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 BCKDKO14874 412 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 NDUFB5O43674 189 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 STX11O75558 287 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 OXSR1O95747 527 aaPredicted RBP19.05■□□□□ 0.64
SEC13-217ENST00000482647 ANGPTL1O95841 491 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 TPOP07202 933 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 OR12D1P0DN82 309 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 MAGEA8P43361 318 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 SF3A3Q12874 501 aaKnown RBP eCLIP19.05■□□□□ 0.641e-6■□□□□ 8.6
SEC13-217ENST00000482647 ARHGAP11BQ3KRB8 267 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 FLYWCH1Q4VC44 716 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 APOOLQ6UXV4 268 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 FJX1Q86VR8 437 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 ZGRF1Q86YA3 2104 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 ZNF527Q8NB42 609 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 NEIL3Q8TAT5 605 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 ZFP90Q8TF47 636 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 RAB8BQ92930 207 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 SARAFQ96BY9 339 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 RTN4RQ9BZR6 473 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 SLC6A15Q9H2J7 730 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 SLC6A13Q9NSD5 602 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 SH3BGRL2Q9UJC5 107 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 ERRFI1Q9UJM3 462 aaPredicted RBP19.05■□□□□ 0.64
SEC13-217ENST00000482647 FBXL2Q9UKC9 423 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 ACAD8Q9UKU7 415 aa19.05■□□□□ 0.64
SEC13-217ENST00000482647 LRRK2Q5S007 2527 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 A0A096LPI6 279 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 A0A1W2PP18 115 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 CCL21O00585 134 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 ADAM10O14672 748 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 GCKP35557 465 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 PER3P56645 1201 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 HEPHL1Q6MZM0 1159 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 DOLPP1Q86YN1 238 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 FAM83FQ8NEG4 500 aaPredicted RBP19.04■□□□□ 0.64
SEC13-217ENST00000482647 COL12A1Q99715 3063 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 DSN1Q9H410 356 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 PTGES2Q9H7Z7 377 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 TPT1P8Q9HAU6 139 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 SLC52A3Q9NQ40 469 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 TINAGQ9UJW2 476 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 MRPS18CQ9Y3D5 142 aaKnown RBP19.04■□□□□ 0.64
SEC13-217ENST00000482647 EXPH5Q8NEV8 1989 aa19.04■□□□□ 0.64
SEC13-217ENST00000482647 IGLV3-32A0A0A0MS00 114 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 C15orf38-AP3S2A0A0A6YYH1 394 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 A0A1W2PQD3 144 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 HMGN4O00479 90 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 C1QCP02747 245 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 GUSBP08236 651 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 CAPN3P20807 821 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 SRD5A2P31213 254 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 DCTP40126 519 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 ATP12AP54707 1039 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 DSCR4P56555 118 aaPredicted RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 GXYLT1Q4G148 440 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 EIPR1Q53HC9 387 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 WIPI1Q5MNZ9 446 aaPredicted RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 MTFR2Q6P444 385 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 YRDCQ86U90 279 aaKnown RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 MISPQ8IVT2 679 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 EID3Q8N140 333 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 FADS6Q8N9I5 356 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 OR2M3Q8NG83 312 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 OR14L1PQ8NHC6 308 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 PNPT1Q8TCS8 783 aaKnown RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 ROPN1LQ96C74 230 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 OR2B2Q9GZK3 357 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 PAIP1Q9H074 479 aaKnown RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 TAS2R10Q9NYW0 307 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 MED11Q9P086 117 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 DKKL1Q9UK85 242 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 LIPT1Q9Y234 373 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 PCDHB14Q9Y5E9 798 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 HRH3Q9Y5N1 445 aa19.03■□□□□ 0.64
SEC13-217ENST00000482647 USP9XQ93008 2570 aaPredicted RBP19.03■□□□□ 0.64
SEC13-217ENST00000482647 C17orf51A8MQB3 221 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 H3BNH8 94 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 FCMRO60667 390 aa19.02■□□□□ 0.64
SEC13-217ENST00000482647 ESRRAP11474 423 aaPredicted RBP19.02■□□□□ 0.64
SEC13-217ENST00000482647 ENDOUP21128 410 aaKnown RBP19.02■□□□□ 0.64
SEC13-217ENST00000482647 DPP4P27487 766 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms