RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 WDR48Q8TAF3 677 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 SPPL2AQ8TCT8 520 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 SFXN5Q8TD22 340 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 RORBQ92753 470 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 MYDGFQ969H8 173 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 FKBP10Q96AY3 582 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TMIGD2Q96BF3 282 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 PPP1R14BQ96C90 147 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TM4SF18Q96CE8 201 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 FER1L6-AS2Q96M78 137 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 C12orf66Q96MD2 445 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 CAMK1GQ96NX5 476 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 NECTIN4Q96NY8 510 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TEFMQ96QE5 360 aaKnown RBP7.22□□□□□ -1.25
SNX13-208ENST00000482558 ZNF300Q96RE9 604 aaPredicted RBP7.22□□□□□ -1.25
SNX13-208ENST00000482558 PIP5K1AQ99755 562 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 SLC17A9Q9BYT1 436 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 RIBC2Q9H4K1 309 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 KIR3DX1Q9H7L2 352 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TRIM45Q9H8W5 580 aaPredicted RBP7.22□□□□□ -1.25
SNX13-208ENST00000482558 FANCEQ9HB96 536 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 ANKHQ9HCJ1 492 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 NRIP3Q9NQ35 241 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TRPV5Q9NQA5 729 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 EXD2Q9NVH0 621 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 UCKL1Q9NWZ5 548 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 LYARQ9NX58 379 aaKnown RBP7.22□□□□□ -1.25
SNX13-208ENST00000482558 FBXL12Q9NXK8 326 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 OR6C2Q9NZP2 312 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 ABCG2Q9UNQ0 655 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 EXO1Q9UQ84 846 aaKnown RBP7.22□□□□□ -1.25
SNX13-208ENST00000482558 LIPT1Q9Y234 373 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 ENPP4Q9Y6X5 453 aa7.22□□□□□ -1.25
SNX13-208ENST00000482558 TCF20Q9UGU0 1960 aaKnown RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 hCG_1809904A0A1W2PP81 198 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PPE2 198 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PR64 198 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 A4D1N5 150 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SH3D21A4FU49 640 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 EME2A4GXA9 379 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 URADA6NGE7 173 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 BOLA2-SMG1P6H3BVE0 249 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 hCG_2039718K7EN88 272 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 PLPP1O14494 284 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 BCAT2O15382 392 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 YY2O15391 372 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TNFSF14O43557 240 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 RGS10O43665 173 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 OR1F1O43749 312 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SMPD2O60906 423 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 BCL10O95999 233 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 AMY1AP04745 511 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 CD1AP06126 327 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TPOP07202 933 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ETFAP13804 333 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MYOGP15173 224 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 EFNA1P20827 205 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 ZNF10P21506 573 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 DRD1P21728 446 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 CPT2P23786 658 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SOAT1P35610 550 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 PIGAP37287 484 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 IST1P53990 364 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 CTXN1P60606 82 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 YPEL5P62699 121 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 CSNK1G2P78368 415 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 OLR1P78380 273 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SLC35A2P78381 396 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MRPS21P82921 87 aaKnown RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 RELAQ04206 551 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TDGQ13569 410 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 IRF3Q14653 427 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MAD2L1BPQ15013 274 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 NEDD8Q15843 81 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MOGQ16653 247 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MEP1AQ16819 746 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SLC5A12Q1EHB4 618 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ZNF829Q3KNS6 432 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 ADPRMQ3LIE5 342 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 SPDYE7PQ495Y7 208 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 FBXO43Q4G163 708 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 IQCCQ4KMZ1 466 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 GPR107Q5VW38 600 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 XAF1Q6GPH4 301 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ANKRD26P1Q6NSI1 321 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 KLHL35Q6PF15 583 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TEPPQ6URK8 271 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 VTCN1Q7Z7D3 282 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 TMEM179BQ7Z7N9 219 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 ADCK1Q86TW2 530 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 RNF130Q86XS8 419 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 PEX5LQ8IYB4 626 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 OR10G2Q8NGC3 310 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 C9orf43Q8TAL5 461 aaPredicted RBP7.21□□□□□ -1.26
SNX13-208ENST00000482558 CEP76Q8TAP6 659 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 GANCQ8TET4 914 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 PROX1Q92786 737 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 BORCS5Q969J3 196 aa7.21□□□□□ -1.26
SNX13-208ENST00000482558 MSANTD3Q96H12 275 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms