RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TMEM201Q5SNT2 666 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 MEDAGQ5VYS4 303 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 FIGNL1Q6PIW4 674 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 BCDIN3DQ7Z5W3 292 aaKnown RBP13.46□□□□□ -0.26
CHD3-211ENST00000481999 ZAR1Q86SH2 424 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 CYP4Z2PQ8N1L4 340 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 ANKRD9Q96BM1 317 aaPredicted RBP13.46□□□□□ -0.26
CHD3-211ENST00000481999 IL4I1Q96RQ9 567 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 NELL2Q99435 816 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 ZSCAN32Q9NX65 697 aa13.46□□□□□ -0.26
CHD3-211ENST00000481999 ETV6P41212 452 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 DBPQ10586 325 aaPredicted RBP13.45□□□□□ -0.26
CHD3-211ENST00000481999 MAPK14Q16539 360 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 PODNL1Q6PEZ8 512 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 FRRS1Q6ZNA5 592 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 GKN2Q86XP6 184 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 KRT73Q86Y46 540 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 IQCF1Q8N6M8 205 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 Q8N9G6 341 aaPredicted RBP13.45□□□□□ -0.26
CHD3-211ENST00000481999 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
CHD3-211ENST00000481999 TAPBPLQ9BX59 468 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 RNF215Q9Y6U7 377 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 A8MU76 341 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 PEX12O00623 359 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 ARHGAP33O14559 1287 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 SNX4O95219 450 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 LGI1O95970 557 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 SCG5P05408 212 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 ADRA2AP08913 450 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 MAOAP21397 527 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD3-211ENST00000481999 FOXL2P58012 376 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 TARDBPQ13148 414 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHD3-211ENST00000481999 DUSP8Q13202 625 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 SPANXN2Q5MJ10 180 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 NCCRP1Q6ZVX7 275 aaPredicted RBP13.45□□□□□ -0.26
CHD3-211ENST00000481999 SLC25A45Q8N413 288 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 CADM4Q8NFZ8 388 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 HTRA1Q92743 480 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
CHD3-211ENST00000481999 RACGAP1Q9H0H5 632 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 MAT2BQ9NZL9 334 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 KCNE5Q9UJ90 142 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
CHD3-211ENST00000481999 TTC28Q96AY4 2481 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 H3BN98 237 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 UGT2B17O75795 530 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 CXCL12P48061 93 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 CFHR1Q03591 330 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 FHL5Q5TD97 284 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 C12orf73Q69YU5 71 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 OR4N2Q8NGD1 307 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 BBS10Q8TAM1 723 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 NUAK2Q9H093 628 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 BCL2L10Q9HD36 194 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 LRIT1Q9P2V4 623 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 RPL36Q9Y3U8 105 aaKnown RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 MN1Q10571 1320 aaPredicted RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 GXYLT2A0PJZ3 443 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 LMO7DNF2Z398 122 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 PIAS2O75928 621 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 GPR75O95800 540 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 DLGAP3O95886 979 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 ZNF10P21506 573 aaPredicted RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 SSTR4P31391 388 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 MGAT2Q10469 447 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 SSX1Q16384 188 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 TYW3Q6IPR3 259 aaKnown RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 PGBD2Q6P3X8 592 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 GDPGP1Q6ZNW5 385 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 IQCHQ86VS3 1027 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 GATAD2AQ86YP4 633 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 GJD3Q8N144 294 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 ZNF655Q8N720 491 aaPredicted RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 FAM83FQ8NEG4 500 aaPredicted RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 TMEM80Q96HE8 168 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 SHDQ96IW2 340 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 OPALINQ96PE5 141 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 LYRM4Q9HD34 91 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 QPCTLQ9NXS2 382 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 CRNNQ9UBG3 495 aaPredicted RBP13.44□□□□□ -0.26
CHD3-211ENST00000481999 PCDHGB6Q9Y5F9 930 aa13.44□□□□□ -0.26
CHD3-211ENST00000481999 A0A075B6Q4 140 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 BCAT2O15382 392 aaPredicted RBP13.43□□□□□ -0.26
CHD3-211ENST00000481999 SLITRK5O94991 958 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 THY1P04216 161 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 GKN3PP0CG01 181 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 PRG2P13727 222 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 DEFA1P59665 94 aa13.43□□□□□ -0.26
CHD3-211ENST00000481999 DEFA3P59666 94 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms