RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CLK3P49761 638 aaKnown RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 PSMD4P55036 377 aaKnown RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 DIO3P55073 304 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 SIRPAP78324 504 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 FAM27E3Q08E93 113 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 GANABQ14697 944 aaKnown RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 UGT3A2Q3SY77 523 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 ARL13AQ5H913 290 aaPredicted RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 PAMR1Q6UXH9 720 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 BTLAQ7Z6A9 289 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 ZAR1Q86SH2 424 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 TGIF2LYQ8IUE0 185 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 DDIASQ8IXT1 998 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 GATSQ8NAP1 163 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 AGR3Q8TD06 166 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 TWIST2Q8WVJ9 160 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 GIMAP5Q96F15 307 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 C16orf58Q96GQ5 468 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 IQCGQ9H095 443 aaKnown RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 OPN3Q9H1Y3 402 aaPredicted RBP16.73■□□□□ 0.27
CLK1-211ENST00000481641 PLEKHF2Q9H8W4 249 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 C3orf14Q9HBI5 128 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 FBXO34Q9NWN3 711 aa16.73■□□□□ 0.27
CLK1-211ENST00000481641 PIP5K1BO14986 540 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 TBX19O60806 448 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 CHEK2O96017 543 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 HRGP04196 525 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 IFI6P09912 130 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 NEFHP12036 1026 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 BCKDHAP12694 445 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 FRKP42685 505 aaPredicted RBP16.72■□□□□ 0.27
CLK1-211ENST00000481641 KIR2DL2P43627 348 aaPredicted RBP16.72■□□□□ 0.27
CLK1-211ENST00000481641 PRR5P85299 388 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 PDE7AQ13946 482 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 FIGNL1Q6PIW4 674 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 RNF165Q6ZSG1 346 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 TRABD2AQ86V40 505 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 SLC16A11Q8NCK7 471 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 OR4C3Q8NH37 302 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 ZFP28Q8NHY6 868 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 FNDC9Q8TBE3 224 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 NUDT8Q8WV74 236 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 HOXB13Q92826 284 aaPredicted RBP16.72■□□□□ 0.27
CLK1-211ENST00000481641 ZBED6CLQ96FA7 236 aaPredicted RBP16.72■□□□□ 0.27
CLK1-211ENST00000481641 ZNF764Q96H86 408 aaPredicted RBP16.72■□□□□ 0.27
CLK1-211ENST00000481641 DACH2Q96NX9 599 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 NPAS1Q99742 590 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 PIGQQ9BRB3 760 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 MKS1Q9NXB0 559 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 VDAC3Q9Y277 283 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 TRAF6Q9Y4K3 522 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 NF1P21359 2839 aa16.72■□□□□ 0.27
CLK1-211ENST00000481641 TTC36A6NLP5 189 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 ATE1O95260 518 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 OXSR1O95747 527 aaPredicted RBP16.71■□□□□ 0.27
CLK1-211ENST00000481641 KLK2P20151 261 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 ARRB2P32121 409 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 C17orf67Q0P5P2 114 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 PON3Q15166 354 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 DUSP5Q16690 384 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 CCNJQ5T5M9 372 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 ZNF474Q6S9Z5 364 aaPredicted RBP16.71■□□□□ 0.27
CLK1-211ENST00000481641 CDRT4Q8N9R6 151 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 CHDHQ8NE62 594 aaPredicted RBP16.71■□□□□ 0.27
CLK1-211ENST00000481641 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 PGM2Q96G03 612 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 KLHDC3Q9BQ90 382 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 NTMQ9P121 344 aa16.71■□□□□ 0.27
CLK1-211ENST00000481641 NUP214P35658 2090 aaPredicted RBP16.7■□□□□ 0.26
CLK1-211ENST00000481641 IGLV3-32A0A0A0MS00 114 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 MSTNO14793 375 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 EMC8O43402 210 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 NPHS1O60500 1241 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 TNFRSF21O75509 655 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 KCNK2O95069 426 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 OPN1LWP04000 364 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 RAF1P04049 648 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 FGF4P08620 206 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 CREB1P16220 341 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 EEFSECP57772 596 aaKnown RBP16.7■□□□□ 0.26
CLK1-211ENST00000481641 VSNL1P62760 191 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 EEF1A1P68104 462 aaKnown RBP16.7■□□□□ 0.26
CLK1-211ENST00000481641 KEAP1Q14145 624 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 VPS26BQ4G0F5 336 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 EEF1A1P5Q5VTE0 462 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 OR2A2Q6IF42 318 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 MFSD12Q6NUT3 480 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 OR7A2PQ8NGA2 310 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 FAM110BQ8TC76 370 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 TCP10LQ8TDR4 215 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 C3orf30Q96M34 536 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 WFIKKN1Q96NZ8 548 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 MS4A4EQ96PG1 132 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 SIRT3Q9NTG7 399 aaPredicted RBP16.7■□□□□ 0.26
CLK1-211ENST00000481641 ACSS1Q9NUB1 689 aaPredicted RBP16.7■□□□□ 0.26
CLK1-211ENST00000481641 TMED5Q9Y3A6 229 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 VPS13CQ709C8 3753 aa16.7■□□□□ 0.26
CLK1-211ENST00000481641 CASKO14936 926 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms