RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 A0A0G2JMM0 328 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 A0A1W2PPB8 328 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 A0A1W2PRS3 328 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 C2orf72A6NCS6 295 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TTC36A6NLP5 189 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 KIR3DP1A8MWS1 328 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CAPN14A8MX76 684 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CLIC1O00299 241 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TP53I11O14683 189 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 MRASO14807 208 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 AIM2O14862 343 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NME2P1O60361 137 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TSPAN2O60636 221 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DCTN3O75935 186 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 KCNK2O95069 426 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 P04436 131 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 KRT16P08779 473 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 ZCCHC18P0CG32 403 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CYP4B1P13584 511 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 ETFAP13804 333 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 COX6B1P14854 86 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 HOXB9P17482 250 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 NME2P22392 152 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 ADSLP30566 484 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 RFC3P40938 356 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CPA2P48052 419 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DNASE1L1P49184 302 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TMED10P49755 219 aaKnown RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 KHKP50053 298 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 RNF144AP50876 292 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 HSF1Q00613 529 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NTRK2Q16620 822 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DECR1Q16698 335 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CYP27C1Q4G0S4 372 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 DCST2Q5T1A1 773 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 LRIF1Q5T3J3 769 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 SLC22A10Q63ZE4 541 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 ZCCHC12Q6PEW1 402 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 XKRXQ6PP77 449 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DLEU7Q6UYE1 221 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NUP54Q7Z3B4 507 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 SULF2Q8IWU5 870 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 GPALPP1Q8IXQ4 340 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TMEM178AQ8NBL3 297 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 PSD4Q8NDX1 1056 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 RP9Q8TA86 221 aaKnown RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 TSPEARQ8WU66 669 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DIO2Q92813 273 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 HOXB13Q92826 284 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 HGDQ93099 445 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 RCN3Q96D15 328 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 FRMD6Q96NE9 622 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 LRRC37BQ96QE4 947 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 STACQ99469 402 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 TREX2Q9BQ50 279 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 SLC39A3Q9BRY0 314 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 BTBD2Q9BX70 525 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CHST11Q9NPF2 352 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 SACM1LQ9NTJ5 587 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 DEPPQ9NTK1 212 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 MRGBPQ9NV56 204 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 ITGB1BP2Q9UKP3 347 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 MEMO1Q9Y316 297 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 PCDHGB6Q9Y5F9 930 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 HRH3Q9Y5N1 445 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 CHCHD2Q9Y6H1 151 aaPredicted RBP8.29□□□□□ -1.08
VCP-206ENST00000480327 DNAJC13O75165 2243 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NCKAP5O14513 1909 aa8.29□□□□□ -1.08
VCP-206ENST00000480327 NINQ8N4C6 2090 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 PINLYPA6NC86 204 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 OR6C70A6NIJ9 312 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 DUXAA6NLW8 204 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 HMGN4O00479 90 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 SLC22A2O15244 555 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 SCO2O43819 266 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 PEX1O43933 1283 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 HS6ST1O60243 411 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 ICOSLGO75144 302 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 UTS2O95399 124 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 CLDN14O95500 239 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 IL33O95760 270 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 NUDT7P0C024 238 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 NAGAP17050 411 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 AGAP20933 346 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 CNR1P21554 472 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 MEOX1P50221 254 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 MVDP53602 400 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 PNLIPRP2P54317 469 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 MTPNP58546 118 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 KCNJ2P63252 427 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 STX5Q13190 355 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 SELPLGQ14242 412 aa8.28□□□□□ -1.08
VCP-206ENST00000480327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.28□□□□□ -1.083e-6■■■■■ 26.9
VCP-206ENST00000480327 GRAMD1BQ3KR37 738 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms