RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SAP130Q9H0E3 1048 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 ZDHHC11Q9H8X9 412 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 SDHAF3Q9NRP4 125 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 B4GALT7Q9UBV7 327 aa18.04■□□□□ 0.48
LIME1-205ENST00000480139 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.04■□□□□ 0.48
LIME1-205ENST00000480139 PRAMEF27A3QJZ7 478 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 NPIPB9F8W1W9 429 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 ETFAP13804 333 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 GPX2P18283 190 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 RFC3P40938 356 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 ATP12AP54707 1039 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 PPIAP62937 165 aaKnown RBP18.03■□□□□ 0.48
LIME1-205ENST00000480139 FOXK1P85037 733 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 MMEL1Q495T6 779 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 KRTCAP3Q53RY4 240 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 RUNDC3AQ59EK9 446 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 TMEM251Q8N6I4 163 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 PCYOX1LQ8NBM8 494 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 GALNT11Q8NCW6 608 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 ST6GALNAC3Q8NDV1 305 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 OR1J4Q8NGS1 313 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 PMM1Q92871 262 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 GPR137Q96N19 417 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 ANKRD27Q96NW4 1050 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 CPPED1Q9BRF8 314 aaPredicted RBP18.03■□□□□ 0.48
LIME1-205ENST00000480139 TBL1XR1Q9BZK7 514 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 P2RX2Q9UBL9 471 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 C15orf41Q9Y2V0 281 aa18.03■□□□□ 0.48
LIME1-205ENST00000480139 LOC100653049A0A140TA62 436 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 EVPLLA8MZ36 301 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 SCDO00767 359 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 MRASO14807 208 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 KIAA0513O60268 411 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 KRT34O76011 436 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 COX4I1P13073 169 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 HPGDP15428 266 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 DCTP40126 519 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 HPCAP84074 193 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 CMPK2Q5EBM0 449 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 APOOLQ6UXV4 268 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 LRRC74BQ6ZQY2 392 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 PLCZ1Q86YW0 608 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 TREML1Q86YW5 311 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 MISPQ8IVT2 679 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 WDSUB1Q8N9V3 476 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 DTNBP1Q96EV8 351 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 JSRP1Q96MG2 331 aaPredicted RBP18.02■□□□□ 0.48
LIME1-205ENST00000480139 LRRC37BQ96QE4 947 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 UBQLN3Q9H347 655 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 PLSCR2Q9NRY7 297 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 WDR45Q9Y484 360 aa18.02■□□□□ 0.48
LIME1-205ENST00000480139 IGLV3-32A0A0A0MS00 114 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 FAM166BA8MTA8 275 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 SCO2O43819 266 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 FCMRO60667 390 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 TNFRSF21O75509 655 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 CBR3O75828 277 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 ZIC2O95409 532 aaPredicted RBP18.01■□□□□ 0.47
LIME1-205ENST00000480139 H6PDO95479 791 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 TFPTP0C1Z6 253 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 RFPL3SP0C7P2 107 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 PRDX6P30041 224 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 MAGEA5P43359 124 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 C17orf67Q0P5P2 114 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 GNA13Q14344 377 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 ZNF141Q15928 474 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 GPAT3Q53EU6 434 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 KLHL26Q53HC5 615 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 FAM91A1Q658Y4 838 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 TYW3Q6IPR3 259 aaKnown RBP18.01■□□□□ 0.47
LIME1-205ENST00000480139 FRRS1Q6ZNA5 592 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
LIME1-205ENST00000480139 MARCH3Q86UD3 253 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 ZNF619Q8N2I2 560 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 METTL25Q8N6Q8 603 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 CMTM5Q96DZ9 223 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 RTN4RQ9BZR6 473 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 IKZF5Q9H5V7 419 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 A4GALTQ9NPC4 353 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 GID8Q9NWU2 228 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 CALML5Q9NZT1 146 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 SEC14L3Q9UDX4 400 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 NCKAP5O14513 1909 aa18.01■□□□□ 0.47
LIME1-205ENST00000480139 TMEM247A6NEH6 219 aa18■□□□□ 0.47
LIME1-205ENST00000480139 NPIPA5E9PKD4 350 aa18■□□□□ 0.47
LIME1-205ENST00000480139 FXYD1O00168 92 aa18■□□□□ 0.47
LIME1-205ENST00000480139 GNB5O14775 395 aa18■□□□□ 0.47
LIME1-205ENST00000480139 NDUFB5O43674 189 aa18■□□□□ 0.47
LIME1-205ENST00000480139 CBX6O95503 412 aa18■□□□□ 0.47
LIME1-205ENST00000480139 ANGPTL1O95841 491 aa18■□□□□ 0.47
LIME1-205ENST00000480139 IGHG3P01860 377 aa18■□□□□ 0.47
LIME1-205ENST00000480139 NR2F1P10589 423 aa18■□□□□ 0.47
LIME1-205ENST00000480139 ENDOUP21128 410 aaKnown RBP18■□□□□ 0.47
LIME1-205ENST00000480139 MAPK11Q15759 364 aa18■□□□□ 0.47
LIME1-205ENST00000480139 SYPL1Q16563 259 aa18■□□□□ 0.47
LIME1-205ENST00000480139 PRAMEF8Q5VWM4 474 aa18■□□□□ 0.47
LIME1-205ENST00000480139 PRAMEF7Q5VXH5 474 aa18■□□□□ 0.47
LIME1-205ENST00000480139 ATCAYQ86WG3 371 aa18■□□□□ 0.47
LIME1-205ENST00000480139 POU5F2Q8N7G0 328 aa18■□□□□ 0.47
LIME1-205ENST00000480139 ANKFN1Q8N957 763 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms