RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TRGV8A0A0C4DH27 118 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 NPIPB9F8W1W9 429 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 LINC01387J3KSC0 135 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 RFXANKO14593 260 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 WDR1O75083 606 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 CELA3AP09093 270 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 GABRA1P14867 456 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SOAT1P35610 550 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 DSCR4P56555 118 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-217ENST00000479161 HSF1Q00613 529 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SQLEQ14534 574 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SF3B4Q15427 424 aaKnown RBP eCLIP14.09□□□□□ -0.152e-8■■□□□ 12.3
C9orf3-217ENST00000479161 GRAMD1BQ3KR37 738 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 ARHGAP11BQ3KRB8 267 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 GXYLT1Q4G148 440 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 EMC4Q5J8M3 183 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 DCST2Q5T1A1 773 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 VASNQ6EMK4 673 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 TMEM211Q6ICI0 200 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 ZNF527Q8NB42 609 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 OR4C3Q8NH37 302 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 JADE3Q92613 823 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 CDS1Q92903 461 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SLC35G5Q96KT7 338 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 DMRTA2Q96SC8 542 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SDF2Q99470 211 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SLC35A5Q9BS91 424 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 TBL1XR1Q9BZK7 514 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 SAP130Q9H0E3 1048 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 PTGES2Q9H7Z7 377 aa14.09□□□□□ -0.15
C9orf3-217ENST00000479161 FIGNL2A6NMB9 653 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 AHRRA9YTQ3 701 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 CCL21O00585 134 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 GNB5O14775 395 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 PDE9AO76083 593 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 CPSF4O95639 269 aaKnown RBP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 KRT75O95678 551 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 OXSR1O95747 527 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 TROVE2P10155 538 aaKnown RBP eCLIP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 ATP6V1C1P21283 382 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 CHMP24386 653 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 GCKP35557 465 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 ADH7P40394 386 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 MDH1P40925 334 aaKnown RBP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 ATP12AP54707 1039 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 NME5P56597 212 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 KLHL26Q53HC5 615 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 WLSQ5T9L3 541 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 XKRXQ6PP77 449 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 APOOLQ6UXV4 268 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 FUNDC1Q8IVP5 155 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 PM20D2Q8IYS1 436 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 FAM83FQ8NEG4 500 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 OR2M3Q8NG83 312 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 OR5AK3PQ8NH89 298 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 GTF2H4Q92759 462 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 YIPF4Q9BSR8 244 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 PRDM14Q9GZV8 571 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 SERHL2Q9H4I8 314 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF385DQ9H6B1 395 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 SLC52A3Q9NQ40 469 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 THUMPD1Q9NXG2 353 aaKnown RBP14.08□□□□□ -0.16
C9orf3-217ENST00000479161 PPP4R1LQ9P1A2 415 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 TINAGQ9UJW2 476 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 LIPT1Q9Y234 373 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
C9orf3-217ENST00000479161 MED12Q93074 2177 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 SCDO00767 359 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ZIC3O60481 467 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 STX11O75558 287 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 TRAPPC6AO75865 159 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ANGPTL1O95841 491 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 TPOP07202 933 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 CPN1P15169 458 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 HPGDP15428 266 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 CHI3L1P36222 383 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-217ENST00000479161 KHKP50053 298 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 GFRA1P56159 465 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 CRYZQ08257 329 aaKnown RBP14.07□□□□□ -0.16
C9orf3-217ENST00000479161 BCL2A1Q16548 175 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 FIGNL1Q6PIW4 674 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 CD163Q86VB7 1156 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 FJX1Q86VR8 437 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF808Q8N4W9 903 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-217ENST00000479161 OR9I1Q8NGQ6 314 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ZFP90Q8TF47 636 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 DUSP19Q8WTR2 217 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF350Q9GZX5 532 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 OR51I1Q9H343 314 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 NPHS2Q9NP85 383 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 SPRR3Q9UBC9 169 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
C9orf3-217ENST00000479161 A0A087WZY1 265 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 C7orf72A4D263 438 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 FAM47E-STBD1D6RA91 191 aa14.06□□□□□ -0.16
C9orf3-217ENST00000479161 NPIPA2E9PIF3 369 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms