RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CLEC18CQ8NCF0 446 aa18.68■□□□□ 0.58
VARS-224ENST00000479051 NEIL3Q8TAT5 605 aa18.68■□□□□ 0.58
VARS-224ENST00000479051 SPDL1Q96EA4 605 aa18.68■□□□□ 0.58
VARS-224ENST00000479051 FLRT3Q9NZU0 649 aa18.68■□□□□ 0.58
VARS-224ENST00000479051 DKKL1Q9UK85 242 aa18.68■□□□□ 0.58
VARS-224ENST00000479051 ALG1L2C9J202 215 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 NPIPA2E9PIF3 369 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 NPIPA3F8WFD2 350 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 CCL21O00585 134 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 NDUFB5O43674 189 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 SEMA7AO75326 666 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 ANGPTL1O95841 491 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 HPCAP84074 193 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 FLYWCH1Q4VC44 716 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 WLSQ5T9L3 541 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 OR5M10Q6IEU7 315 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 FGD2Q7Z6J4 655 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 MARCH3Q86UD3 253 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 CD163Q86VB7 1156 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 RNF130Q86XS8 419 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 CHERPQ8IWX8 916 aaKnown RBP18.67■□□□□ 0.58
VARS-224ENST00000479051 CHDHQ8NE62 594 aaPredicted RBP18.67■□□□□ 0.58
VARS-224ENST00000479051 OR14L1PQ8NHC6 308 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 SSC4DQ8WTU2 575 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 XAGE5Q8WWM1 108 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 SLC6A15Q9H2J7 730 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 SERHL2Q9H4I8 314 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 PTGES2Q9H7Z7 377 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 ERRFI1Q9UJM3 462 aaPredicted RBP18.67■□□□□ 0.58
VARS-224ENST00000479051 TINAGQ9UJW2 476 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 ACAD8Q9UKU7 415 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 KCNE3Q9Y6H6 103 aa18.67■□□□□ 0.58
VARS-224ENST00000479051 C15orf38-AP3S2A0A0A6YYH1 394 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 H3BNH8 94 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 STX11O75558 287 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 OR12D1P0DN82 309 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 SRD5A2P31213 254 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 DCTP40126 519 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 CASP9P55211 416 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 GANABQ14697 944 aaKnown RBP18.66■□□□□ 0.58
VARS-224ENST00000479051 ARHGAP11BQ3KRB8 267 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 ZAR1Q86SH2 424 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 FUNDC1Q8IVP5 155 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 FAM83FQ8NEG4 500 aaPredicted RBP18.66■□□□□ 0.58
VARS-224ENST00000479051 OR4C3Q8NH37 302 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 DUSP19Q8WTR2 217 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 PHF12Q96QT6 1004 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 SDF2Q99470 211 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 TP63Q9H3D4 680 aaPredicted RBP18.66■□□□□ 0.58
VARS-224ENST00000479051 FBXO34Q9NWN3 711 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 KLHL14Q9P2G3 628 aa18.66■□□□□ 0.58
VARS-224ENST00000479051 A0A1W2PQD3 144 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 FIGNL2A6NMB9 653 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 ENDOUP21128 410 aaKnown RBP18.65■□□□□ 0.58
VARS-224ENST00000479051 DSCR4P56555 118 aaPredicted RBP18.65■□□□□ 0.58
VARS-224ENST00000479051 SRSF1Q07955 248 aaKnown RBP eCLIP18.65■□□□□ 0.58
VARS-224ENST00000479051 SLC2A7Q6PXP3 512 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 FADS6Q8N9I5 356 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 ZFP90Q8TF47 636 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 GTF2H4Q92759 462 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 OR2B2Q9GZK3 357 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 DSN1Q9H410 356 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 RAD21L1Q9H4I0 556 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 POLE3Q9NRF9 147 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 TAS2R10Q9NYW0 307 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 FBXL2Q9UKC9 423 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 LIPT1Q9Y234 373 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 MRPS18CQ9Y3D5 142 aaKnown RBP18.65■□□□□ 0.58
VARS-224ENST00000479051 ZNF407Q9C0G0 2248 aa18.65■□□□□ 0.58
VARS-224ENST00000479051 HIVEP3Q5T1R4 2406 aa18.64■□□□□ 0.58
VARS-224ENST00000479051 GTF3C1Q12789 2109 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 A0A096LPI6 279 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 ZNHIT1O43257 154 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 DPP4P27487 766 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 MSX1P28360 303 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 ATP12AP54707 1039 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 GXYLT1Q4G148 440 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 GPAT3Q53EU6 434 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 EIPR1Q53HC9 387 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 WIPI1Q5MNZ9 446 aaPredicted RBP18.64■□□□□ 0.57
VARS-224ENST00000479051 HEPHL1Q6MZM0 1159 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 CGB2Q6NT52 195 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
VARS-224ENST00000479051 YRDCQ86U90 279 aaKnown RBP18.64■□□□□ 0.57
VARS-224ENST00000479051 IFNEQ86WN2 208 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 DOLPP1Q86YN1 238 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 OR2M3Q8NG83 312 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 PNPT1Q8TCS8 783 aaKnown RBP18.64■□□□□ 0.57
VARS-224ENST00000479051 RAB8BQ92930 207 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 ZNF317Q96PQ6 595 aaPredicted RBP18.64■□□□□ 0.57
VARS-224ENST00000479051 NMUR2Q9GZQ4 415 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 ZNF385DQ9H6B1 395 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 TPT1P8Q9HAU6 139 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 MED11Q9P086 117 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 SPRR3Q9UBC9 169 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 BAHCC1Q9P281 2608 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 DNAJC13O75165 2243 aa18.64■□□□□ 0.57
VARS-224ENST00000479051 NCKAP5O14513 1909 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 FLNCQ14315 2725 aa18.63■□□□□ 0.57
VARS-224ENST00000479051 IGLV3-32A0A0A0MS00 114 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms