RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PAQR7Q86WK9 346 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 TMEM52Q8NDY8 209 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SAMD8Q96LT4 415 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SPATA5L1Q9BVQ7 753 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 PAQR5Q9NXK6 330 aaPredicted RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 SLC7A7Q9UM01 511 aa10.09□□□□□ -0.79
VPS52-217ENST00000478934 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
VPS52-217ENST00000478934 A0A1W2PQF6 199 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CACNB4O00305 520 aaPredicted RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 PEX12O00623 359 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CASKO14936 926 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 PRODHO43272 600 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 SPTBP11277 2137 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CPEP16870 476 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 DDX5P17844 614 aaKnown RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 CELP19835 753 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CPN2P22792 545 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ACSL1P33121 698 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ACTR1BP42025 376 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 RFX3P48380 749 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CDH11P55287 796 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ACTR1AP61163 376 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 TRAM2Q15035 370 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ITPRIPL2Q3MIP1 535 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 PUS10Q3MIT2 529 aaKnown RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 GLYR1Q49A26 553 aaPredicted RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 MFSD12Q6NUT3 480 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 SLC36A4Q6YBV0 504 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ZNF836Q6ZNA1 936 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 TRIM69Q86WT6 500 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 NRROSQ86YC3 692 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 SFXN5Q8TD22 340 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 GNPDA2Q8TDQ7 276 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 SLC41A3Q96GZ6 507 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 SRMSQ9H3Y6 488 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ISG20L2Q9H9L3 353 aaKnown RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 ADAP2Q9NPF8 381 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ATP13A2Q9NQ11 1180 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 KCNE5Q9UJ90 142 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CLCA3PQ9Y6N3 262 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 MN1Q10571 1320 aaPredicted RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 FAM47E-STBD1D6RA91 191 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CASC3O15234 703 aaKnown RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 HCRTR1O43613 425 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 RASGRP1O95267 797 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ACADMP11310 421 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 KIR2DL3P43628 341 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 PPP1CAP62136 330 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 TSPAN31Q12999 210 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
VPS52-217ENST00000478934 PRRT3Q5FWE3 981 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ANKRD54Q6NXT1 300 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 BHLHB9Q6PI77 547 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 IL17RCQ8NAC3 791 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 PFN4Q8NHR9 129 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 KCTD7Q96MP8 289 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 OR2M4Q96R27 311 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 HCAR1Q9BXC0 346 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 ACTRT3Q9BYD9 372 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 KCMF1Q9P0J7 381 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 TRAPPC4Q9Y296 219 aa10.08□□□□□ -0.8
VPS52-217ENST00000478934 GSAPA4D1B5 854 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 LRRC72A6NJI9 287 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 PLA2G10O15496 165 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 EGFP01133 1207 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 POU2F2P09086 479 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 LSSP48449 732 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ABATP80404 500 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 KRR1Q13601 381 aaKnown RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 EXOSC7Q15024 291 aaKnown RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
VPS52-217ENST00000478934 Q5BKY6 102 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 FIGNL1Q6PIW4 674 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 IL20RBQ6UXL0 311 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ASPGQ86U10 573 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 CPOQ8IVL8 374 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 FLVCR1-AS1Q8TAF5 88 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 DPH1Q9BZG8 443 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 KLF15Q9UIH9 416 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 SNX7Q9UNH6 387 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZNF443Q9Y2A4 671 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 ARHGEF17Q96PE2 2063 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 OR6C74A6NCV1 312 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 GPR89AB7ZAQ6 455 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 SMLR1H3BR10 107 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 SURF4O15260 269 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 KLF8O95600 359 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 ZGLP1P0C6A0 271 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 GPR89BP0CG08 455 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 HTR2AP28223 471 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 ATP6V1E1P36543 226 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 SLC1A3P43003 542 aa10.07□□□□□ -0.8
VPS52-217ENST00000478934 DLX2Q07687 328 aaPredicted RBP10.07□□□□□ -0.8
VPS52-217ENST00000478934 SCN1BQ07699 218 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms