RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 CALCOCO2Q13137 446 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 TAB1Q15750 504 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 NRF1Q16656 503 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 DECR1Q16698 335 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 GGTA1PQ4G0N0 100 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 SFRP5Q5T4F7 317 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 MROH9Q5TGP6 573 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.3■□□□□ 0.04
VIM-204ENST00000478746 ZNF619Q8N2I2 560 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 KBTBD8Q8NFY9 601 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 OR10H5Q8NGA6 315 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 ADGRG7Q96K78 797 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 GPR78Q96P69 363 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 TRIM2Q9C040 744 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 GRIP2Q9C0E4 1043 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 FAIMQ9NVQ4 179 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 CISD1Q9NZ45 108 aaKnown RBP15.3■□□□□ 0.04
VIM-204ENST00000478746 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 VDAC3Q9Y277 283 aa15.3■□□□□ 0.04
VIM-204ENST00000478746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.041e-22■■□□□ 12.7
VIM-204ENST00000478746 A0A096LNT2 108 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 DPRXA6NFQ7 191 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 ADAMDEC1O15204 470 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 DLX3O60479 287 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 GCM2O75603 506 aaPredicted RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 IL3P08700 152 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 AGTR1P30556 359 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 NUDT6P53370 316 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 CASP9P55211 416 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 DSCR9P59020 149 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 VLDLRP98155 873 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 BSPH1Q075Z2 132 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 GALNT10Q86SR1 603 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 ATG4DQ86TL0 474 aaPredicted RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 FAM9CQ8IZT9 166 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 GABRG1Q8N1C3 465 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 PIWIL2Q8TC59 973 aaKnown RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 FBF1Q8TES7 1133 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 TRIM44Q96DX7 344 aaPredicted RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 ADAD1Q96M93 576 aaKnown RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 TBL1XR1Q9BZK7 514 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 SLC35C2Q9NQQ7 365 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 VPS29Q9UBQ0 182 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 MRTO4Q9UKD2 239 aaKnown RBP15.29■□□□□ 0.04
VIM-204ENST00000478746 SNX6Q9UNH7 406 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 B3GALT5Q9Y2C3 310 aa15.29■□□□□ 0.04
VIM-204ENST00000478746 A0A096LPK6 155 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 IGLV3-32A0A0A0MS00 114 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 TNFSF11O14788 317 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 NDUFB5O43674 189 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 COQ9O75208 318 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 NTN1O95631 604 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 IL33O95760 270 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 ANGPTL1O95841 491 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 PYGBP11216 843 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 ZNF17P17021 662 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 PAFAH1B1P43034 410 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 RFX3P48380 749 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 RAC1P63000 192 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 SRSF2Q01130 221 aaKnown RBP15.28■□□□□ 0.04
VIM-204ENST00000478746 LOXL1Q08397 574 aaPredicted RBP15.28■□□□□ 0.04
VIM-204ENST00000478746 NAB1Q13506 487 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 PDSS1Q5T2R2 415 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 CYB5R2Q6BCY4 276 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 CLEC2AQ6UVW9 174 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 DTX2Q86UW9 622 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 OR2V1Q8NHB1 315 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 OSTF1Q92882 214 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 BBS4Q96RK4 519 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 USB1Q9BQ65 265 aaKnown RBP15.28■□□□□ 0.04
VIM-204ENST00000478746 DPH5Q9H2P9 285 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 MCM8Q9UJA3 840 aa15.28■□□□□ 0.04
VIM-204ENST00000478746 FREM1Q5H8C1 2179 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 A0A0J9YW62 118 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 STX16-NPEPL1H3BU86 382 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 STX16O14662 325 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 RAMP1O60894 148 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 UTS2O95399 124 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 PTNP21246 168 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 TYK2P29597 1187 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 STX2P32856 288 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 PSMD4P55036 377 aaKnown RBP15.27■□□□□ 0.04
VIM-204ENST00000478746 CARD18P57730 90 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 MRPS25P82663 173 aaKnown RBP15.27■□□□□ 0.04
VIM-204ENST00000478746 HEPACAMQ14CZ8 416 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 TECRLQ5HYJ1 363 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 TMEM201Q5SNT2 666 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 AGAP6Q5VW22 663 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 HBMQ6B0K9 141 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 ROBO4Q8WZ75 1007 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 KISS1RQ969F8 398 aaPredicted RBP15.27■□□□□ 0.04
VIM-204ENST00000478746 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.04
VIM-204ENST00000478746 REXO5Q96IC2 774 aaKnown RBP15.27■□□□□ 0.04
VIM-204ENST00000478746 HBEGFQ99075 208 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 Q9N2J8 555 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 PYCARDQ9ULZ3 195 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 TMCO1Q9UM00 188 aa15.27■□□□□ 0.04
VIM-204ENST00000478746 SAR1BQ9Y6B6 198 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms