RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 LINC00299Q6ZSB3 139 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RASSF6Q6ZTQ3 369 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 MBOAT2Q6ZWT7 520 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 VRK2Q86Y07 508 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 CDK20Q8IZL9 346 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 CYP4Z2PQ8N1L4 340 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 ZNF527Q8NB42 609 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 PLPP5Q8NEB5 264 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 C17orf47Q8NEP4 570 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 OR4D11Q8NGI4 311 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 OR14A16Q8NHC5 309 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 WDR36Q8NI36 951 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 MUL1Q969V5 352 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 GTPBP3Q969Y2 492 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 CCDC74AQ96AQ1 378 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SLC41A3Q96GZ6 507 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 LOXL4Q96JB6 756 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SLC38A2Q96QD8 506 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 TGIF2Q9GZN2 237 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SPRTNQ9H040 489 aaPredicted RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 OR10A5Q9H207 317 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 TMEM27Q9HBJ8 222 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SLC25A19Q9HC21 320 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 HHATLQ9HCP6 504 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 TIMMDC1Q9NPL8 285 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 MAN2C1Q9NTJ4 1040 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 MED17Q9NVC6 651 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RLIMQ9NVW2 624 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 FKBP14Q9NWM8 211 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 REV1Q9UBZ9 1251 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 PSORS1C1Q9UIG5 152 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 MKLN1Q9UL63 735 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SLC6A14Q9UN76 642 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RNF6Q9Y252 685 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 SLC35A3Q9Y2D2 325 aa7.37□□□□□ -1.23
VMA21-203ENST00000477649 RPL36Q9Y3U8 105 aaKnown RBP7.37□□□□□ -1.23
VMA21-203ENST00000477649 A0A087WUU8 490 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 IGKV3D-11A0A0A0MRZ8 115 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ENO4A6NNW6 628 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 EFCAB7A8K855 629 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 PTGES3LE9PB15 166 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 NPIPB9F8W1W9 429 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 H3BN98 237 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 H3BSA7 217 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 HMGN1P05114 100 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CDK1P06493 297 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CT62P0C5K7 136 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZNF883P0CG24 379 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 AGXTP21549 392 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CSF2RBP32927 897 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 PPICP45877 212 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SNRPNP63162 240 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 CDK5Q00535 292 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CSTF1Q05048 431 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.36□□□□□ -1.23
VMA21-203ENST00000477649 PMS2P3Q13401 168 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 LSAMPQ13449 338 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZNF267Q14586 743 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 SEC23BQ15437 767 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 GPR68Q15743 365 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 NEDD8Q15843 81 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 HLA-BQ31612 363 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 AMZ1Q400G9 498 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 MRPL2Q5T653 305 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 SYT6Q5T7P8 510 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 UBE2UQ5VVX9 321 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 NKAIN2Q5VXU1 208 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 XAF1Q6GPH4 301 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SLC27A4Q6P1M0 643 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZNF836Q6ZNA1 936 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 TTLL10Q6ZVT0 673 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 PTCHD4Q6ZW05 846 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ARHGAP22Q7Z5H3 698 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZER1Q7Z7L7 766 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 MRGPREQ86SM8 312 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 GTF2IRD2Q86UP8 949 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 RBM45Q8IUH3 476 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 CLVS1Q8IUQ0 354 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 LACC1Q8IV20 430 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CCDC71Q8IV32 467 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 FAM26EQ8N5C1 309 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 LSMEM1Q8N8F7 131 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZNF615Q8N8J6 731 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZSCAN1Q8NBB4 408 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 OR1L3Q8NH93 324 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 CNIH3Q8TBE1 160 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 TEX47Q8TBZ9 253 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 PIGKQ92643 395 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ISOC1Q96CN7 298 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 ZNF501Q96CX3 271 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 PTCHD1Q96NR3 888 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 SIGLEC11Q96RL6 698 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 COPS4Q9BT78 406 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 POLDIP3Q9BY77 421 aaKnown RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 CCDC90BQ9GZT6 254 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 LRRN3Q9H3W5 708 aa7.36□□□□□ -1.23
VMA21-203ENST00000477649 GPN2Q9H9Y4 310 aaPredicted RBP7.36□□□□□ -1.23
VMA21-203ENST00000477649 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms