RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 KRT20P35900 424 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 UGT2B10P36537 528 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 FRKP42685 505 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CPA2P48052 419 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 RFX3P48380 749 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CCT5P48643 541 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PCYT1AP49585 367 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PPP2R2AP63151 447 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 MRPS22P82650 360 aaKnown RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 HSPB3Q12988 150 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PDE7AQ13946 482 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 PCLAFQ15004 111 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 DECR1Q16698 335 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 IMPG1Q17R60 797 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CTU2Q2VPK5 515 aaKnown RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CCDC153Q494R4 210 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 GLYR1Q49A26 553 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 RAET1LQ5VY80 246 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 KANK2Q63ZY3 851 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 Q71RC1 249 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF550Q7Z398 422 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 TDRPQ86YL5 185 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 C4orf33Q8N1A6 199 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CNEP1R1Q8N9A8 125 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 OR2W6PQ8NHA6 318 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 CLHC1Q8NHS4 586 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 KIF18AQ8NI77 898 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 FBXO30Q8TB52 745 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 GPR151Q8TDV0 419 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SMPDL3BQ92485 455 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 ADGRG7Q96K78 797 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 LRTM1Q9HBL6 345 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 Q9N2J8 555 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 EQTNQ9NQ60 294 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 MIEF1Q9NQG6 463 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 RRAGDQ9NQL2 400 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 DDX18Q9NVP1 670 aaKnown RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 C1orf109Q9NX04 203 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 GIMAP2Q9UG22 337 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 FLNAP21333 2647 aaKnown RBP6.31□□□□□ -1.4
HDAC3-207ENST00000475549 DNHD1Q96M86 4753 aa6.31□□□□□ -1.4
HDAC3-207ENST00000475549 SMIM23A6NLE4 172 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ALG1L2C9J202 215 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 H3BML4 177 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 AZIN1O14977 448 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 LSM1O15116 133 aaKnown RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ADAMDEC1O15204 470 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 PDPK1O15530 556 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 TBX19O60806 448 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 KCNK2O95069 426 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CHRNGP07510 517 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 FGF4P08620 206 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 IFI6P09912 130 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CD8BP10966 210 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 LAMP1P11279 417 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 BCKDHAP12694 445 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 NID1P14543 1247 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 TBXA2RP21731 343 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ALDH3A1P30838 453 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 NTSP30990 170 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CPOXP36551 454 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CD79BP40259 229 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 PRKAG1P54619 331 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 NAA20P61599 178 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 EEF1A1P68104 462 aaKnown RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 SIRPAP78324 504 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 C17orf67Q0P5P2 114 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 GANABQ14697 944 aaKnown RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CD226Q15762 336 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 DUSP5Q16690 384 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ARL13AQ5H913 290 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CFAP157Q5JU67 520 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CCNJQ5T5M9 372 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 EEF1A1P5Q5VTE0 462 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 LIPMQ5VYY2 423 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 FBXW10Q5XX13 1052 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 FIGNL1Q6PIW4 674 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 RNF165Q6ZSG1 346 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CIARTQ8N365 385 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 BANPQ8N9N5 519 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 EIF1ADQ8N9N8 165 aaKnown RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 POC1BQ8TC44 478 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 SLC9A6Q92581 669 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 OTUB1Q96FW1 271 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF764Q96H86 408 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 METTL2AQ96IZ6 378 aaKnown RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 C3orf30Q96M34 536 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 TSSK3Q96PN8 268 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 CCT7Q99832 543 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 REEP4Q9H6H4 257 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 SDHAF3Q9NRP4 125 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 PLSCR4Q9NRQ2 329 aa6.3□□□□□ -1.4
HDAC3-207ENST00000475549 SIRT3Q9NTG7 399 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-207ENST00000475549 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms