RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 GCNT6Q5T4J0 391 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 INTS11Q5TA45 600 aaKnown RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 FBXW10Q5XX13 1052 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 FAM180BQ6P0A1 224 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 MTFR2Q6P444 385 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 SZRD1Q7Z422 152 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 C9orf40Q8IXQ3 194 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 OR5AK3PQ8NH89 298 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 PNPT1Q8TCS8 783 aaKnown RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 ASB15Q8WXK1 588 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 PPWD1Q96BP3 646 aaKnown RBP14.37□□□□□ -0.11
CPSF3-203ENST00000475482 ELP4Q96EB1 424 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 SLC35G5Q96KT7 338 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 DGAT2Q96PD7 388 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 TMEM38AQ9H6F2 299 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 RNPEPL1Q9HAU8 725 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 HPF1Q9NWY4 346 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 NINQ8N4C6 2090 aa14.37□□□□□ -0.11
CPSF3-203ENST00000475482 HRKO00198 91 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 PLOD2O00469 737 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 CXCR6O00574 342 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 CLPSP04118 112 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 GPIP06744 558 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 BMP2P12643 396 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 KHKP50053 298 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 GZMMP51124 257 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 DSTNP60981 165 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 GNA13Q14344 377 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 CMPK2Q5EBM0 449 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF787Q6DD87 383 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 LYPD8Q6UX82 237 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 CYP2R1Q6VVX0 501 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 RPTNQ6XPR3 784 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 RNF130Q86XS8 419 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 EID3Q8N140 333 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 METTL25Q8N6Q8 603 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF675Q8TD23 568 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 FIG4Q92562 907 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 FAM162AQ96A26 154 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 ART5Q96L15 291 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 SGCZQ96LD1 299 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 S100A14Q9HCY8 104 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 SH2D2AQ9NP31 389 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 DDX18Q9NVP1 670 aaKnown RBP14.36□□□□□ -0.11
CPSF3-203ENST00000475482 NTMQ9P121 344 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 COPS7AQ9UBW8 275 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 TINAGQ9UJW2 476 aa14.36□□□□□ -0.11
CPSF3-203ENST00000475482 A0A087WV62 115 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 TCRBV3S1A0A5B6 114 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 PINLYPA6NC86 204 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 DUXAA6NLW8 204 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 DYRK3O43781 588 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 GLSO94925 669 aaPredicted RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 AGR2O95994 175 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 AGAP20933 346 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 NT5EP21589 574 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 PCGF2P35227 344 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 SLC37A1P57057 533 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 GPR85P60893 370 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 ADORA2A-AS1P86434 159 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 RCN1Q15293 331 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF791Q3KP31 576 aaPredicted RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 OPN5Q6U736 354 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 TMEM107Q6UX40 140 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 IL20RBQ6UXL0 311 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 RTL4Q6ZR62 310 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 ZZZ3Q8IYH5 903 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF808Q8N4W9 903 aaPredicted RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 SLC15A4Q8N697 577 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 NUP43Q8NFH3 380 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 OR9A2Q8NGT5 310 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 DUS3LQ96G46 650 aaKnown RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 MAGED4Q96JG8 741 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 MS4A4EQ96PG1 132 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 UGT2B28Q9BY64 529 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 STX18Q9P2W9 335 aaKnown RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 RPS6KA6Q9UK32 745 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 ANGPT4Q9Y264 503 aa14.35□□□□□ -0.11
CPSF3-203ENST00000475482 KLF2Q9Y5W3 355 aaPredicted RBP14.35□□□□□ -0.11
CPSF3-203ENST00000475482 NUP214P35658 2090 aaPredicted RBP14.34□□□□□ -0.11
CPSF3-203ENST00000475482 DHRS12A0PJE2 317 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 C5orf58C9J3I9 102 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ADAM10O14672 748 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 HS6ST1O60243 411 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 PLOD3O60568 738 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 COQ9O75208 318 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 TNFRSF21O75509 655 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 KRT36O76013 467 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 IFNA14P01570 189 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ETFAP13804 333 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ATP6V1B2P21281 511 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 CNR1P21554 472 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MATN1P21941 496 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 SLC7A1P30825 629 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 PTGER1P34995 402 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MC3RP41968 323 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MVDP53602 400 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 PRKAG1P54619 331 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms