RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-218	ENST00000475445	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	KIF18B	Q86Y91	864 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	TMEM163	Q8TC26	289 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	LCN9	Q8WX39	176 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	DIO2	Q92813	273 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	GABRG3	Q99928	467 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	SLC30A2	Q9BRI3	323 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	TRMT61B	Q9BVS5	477 aa	Known RBP	13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	SYNPO2L	Q9H987	977 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	FGF20	Q9NP95	211 aa	Predicted RBP	13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	KLHL28	Q9NXS3	571 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	NTM	Q9P121	344 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	CPNE7	Q9UBL6	633 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	KLF15	Q9UIH9	416 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	TRAPPC4	Q9Y296	219 aa		13.44	□□□□□ -0.26
GGA1-218	ENST00000475445	GSAP	A4D1B5	854 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	DUXA	A6NLW8	204 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	FAM170B	A6NMN3	283 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PRODH	O43272	600 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	AGR2	O95994	175 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	ACP2	P11117	423 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PSKH1	P11801	424 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	ALAS2	P22557	587 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	GTF2E2	P29084	291 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	NTSR1	P30989	418 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SEPHS1	P49903	392 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	RORC	P51449	518 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	RAB40B	Q12829	278 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MFSD13A	Q14CX5	517 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	GARNL3	Q5VVW2	1013 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	RASSF6	Q6ZTQ3	369 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	NOXA1	Q86UR1	476 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PHC2	Q8IXK0	858 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	RNF170	Q96K19	258 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SLC38A2	Q96QD8	506 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MYADM	Q96S97	322 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	ISYNA1	Q9NPH2	558 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SLC39A1	Q9NY26	324 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MKL2	Q9ULH7	1088 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	COLQ	Q9Y215	455 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	CACNG2	Q9Y698	323 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SZT2	Q5T011	3432 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3D	A0A087WVF3	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3I	A0A087WXS9	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3E	A0A087X179	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3K	A0A087X1G2	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3L	B9A6J9	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	UBXN7	O94888	489 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3H	P0C7X1	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	CPE	P16870	476 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MYL12A	P19105	171 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	BMP8B	P34820	402 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	OR2B6	P58173	313 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	BTN3A2	P78410	334 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3G	Q6DHY5	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3C	Q6IPX1	549 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	VN1R4	Q7Z5H5	301 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	HMGN2P46	Q86SG4	172 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	ASPG	Q86U10	573 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SLC22A18	Q96BI1	424 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	KCNS3	Q9BQ31	491 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TTYH2	Q9BSA4	534 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	QRSL1	Q9H0R6	528 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PHF11	Q9UIL8	331 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445		A0A1W2PS29	197 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	ZNF780A	O75290	641 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MAT2A	P31153	395 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	RPS19	P39019	145 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	GAS1	P54826	345 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MINDY4	Q4G0A6	757 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	HEPHL1	Q6MZM0	1159 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	USP30	Q70CQ3	517 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	VRK2	Q86Y07	508 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PM20D2	Q8IYS1	436 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	UBQLNL	Q8IYU4	475 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PIGX	Q8TBF5	258 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	C10orf90	Q96M02	699 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MS4A4E	Q96PG1	132 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PLA2G12A	Q9BZM1	189 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SAP130	Q9H0E3	1048 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SLC28A3	Q9HAS3	691 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	CD93	Q9NPY3	652 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	EQTN	Q9NQ60	294 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	PRDM9	Q9NQV7	894 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	CTPS2	Q9NRF8	586 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	COQ3	Q9NZJ6	369 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TBC1D29	Q9UFV1	150 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	MSRA	Q9UJ68	235 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	SCML1	Q9UN30	329 aa		13.43	□□□□□ -0.26
GGA1-218	ENST00000475445	TMEM129	A0AVI4	362 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	EPOP	A6NHQ4	379 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	ZNF98	A6NK75	572 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	RFXAP	O00287	272 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	STK25	O00506	426 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	CCNYL3	P0C7X3	344 aa		13.42	□□□□□ -0.26
GGA1-218	ENST00000475445	SOX9	P48436	509 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms