RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 LMNTD1Q8N9Z9 388 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 GPR26Q8NDV2 337 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 OR5W2Q8NH69 310 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CHPT1Q8WUD6 406 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 PAQR5Q9NXK6 330 aaPredicted RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 A0A0U1RQK1 487 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 FAM230AA0A1W2PPH8 454 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SHOXO15266 292 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CCBE1Q6UXH8 406 aaPredicted RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 C15orf39Q6ZRI6 1047 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 PXKQ7Z7A4 578 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 KIF18BQ86Y91 864 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CPOQ8IVL8 374 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 MDGA1Q8NFP4 955 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 ADOQ96SZ5 270 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 DMRT3Q9NQL9 472 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 C12orf71A8MTZ7 269 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 G3V2L1 256 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 MPIG6BO95866 241 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CHRM4P08173 479 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 PVRP15151 417 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 ADH6P28332 368 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SOX9P48436 509 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 C3orf38Q5JPI3 329 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 KRBOX4Q5JUW0 171 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 MRPL21Q7Z2W9 205 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 VWA5B2Q8N398 1253 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 HORMAD2Q8N7B1 307 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CDC6Q99741 560 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 LSM5Q9Y4Y9 91 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 LTBP3Q9NS15 1303 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 A6NIN4 97 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 GPR37L1O60883 481 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 DBHP09172 617 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 OSMP13725 252 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 EDN3P14138 238 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 GABRR1P24046 479 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SCD5Q86SK9 330 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 TEX19Q8NA77 164 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 FKBP10Q96AY3 582 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 S100PBPQ96BU1 408 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 EMP2P54851 167 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 CLEC1AQ8NC01 280 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 OR52E1Q8NGJ3 308 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SLC25A18Q9H1K4 315 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 FBRSQ9HAH7 460 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 MEPEQ9NQ76 525 aaPredicted RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 B3GNT2Q9NY97 397 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 HAO2Q9NYQ3 351 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 NUDT21O43809 227 aaKnown RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 ETV4P43268 484 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SELENOWP63302 87 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 TSPYL5Q86VY4 417 aaPredicted RBP10.35□□□□□ -0.75
VAPB-204ENST00000475243 ACOT4Q8N9L9 421 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SDSLQ96GA7 329 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 SMIM14Q96QK8 99 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 ENPP4Q9Y6X5 453 aa10.35□□□□□ -0.75
VAPB-204ENST00000475243 UBL4AP11441 157 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 BMP4P12644 408 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 FUT1P19526 365 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TAP2Q03519 686 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PIANPQ8IYJ0 282 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 OR52R1Q8NGF1 315 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 HOXD1Q9GZZ0 328 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 HCSTQ9UBK5 93 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 WDPCPO95876 746 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 LUMP51884 338 aaPredicted RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 MCCD1P59942 119 aaPredicted RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 SERTAD2Q14140 314 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 VHLLQ6RSH7 139 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 MEX3BQ6ZN04 569 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 LRRC18Q8N456 261 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 NDNFQ8TB73 568 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CACNG6Q9BXT2 260 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PPIL3Q9H2H8 161 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 HEBP1Q9NRV9 189 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 SULT2B1O00204 365 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 LCKP06239 509 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 OR8U9P0C7N5 309 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 EEF1A2Q05639 463 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 CCNJQ5T5M9 372 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 LILRB2Q8N423 598 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 PRELID1Q9Y255 219 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 SETD1AO15047 1707 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 PRAMEF26H0Y7S4 382 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 SLC6A11P48066 632 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 ERVK-25P63136 954 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 FGL1Q08830 312 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 ITFG2Q969R8 447 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 ZNF775Q96BV0 537 aaPredicted RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 USB1Q9BQ65 265 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 FAIMQ9NVQ4 179 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PLEK2Q9NYT0 353 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 ABRACLQ9P1F3 81 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms