RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CDHR4A6H8M9 788 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TMEM200CA6NKL6 621 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 G3V2T6 193 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ADAMDEC1O15204 470 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 DENRO43583 198 aaKnown RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TSPAN2O60636 221 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TPST2O60704 377 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 FMO6PO60774 539 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 STK17BO94768 372 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 IL33O95760 270 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 IGHEP01854 428 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 MT-ND1P03886 318 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 IFNW1P05000 195 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 HEXBP07686 556 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 UMODP07911 640 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 NID1P14543 1247 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 UQCRBP14927 111 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 NAGAP17050 411 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TNNI3P19429 210 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ATP6V1C1P21283 382 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 SLC5A2P31639 672 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 HSPA13P48723 471 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ALDH3A2P51648 485 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PGDP52209 483 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ATP12AP54707 1039 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 AQP4P55087 323 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF155Q12901 538 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 DAG1Q14118 895 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 DGCR6Q14129 220 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 NPTX1Q15818 432 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 GRAMD1BQ3KR37 738 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF311Q5JNZ3 666 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 HES3Q5TGS1 186 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 FNDC7Q5VTL7 733 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF770Q6IQ21 691 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 FAHD1Q6P587 224 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 DHRS13Q6UX07 377 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 LANCL3Q6ZV70 420 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 OLIG3Q7RTU3 272 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TIPARPQ7Z3E1 657 aaKnown RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CPEB2Q7Z5Q1 589 aaKnown RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TMEM179BQ7Z7N9 219 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZAR1Q86SH2 424 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CARM1Q86X55 608 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 VRK2Q86Y07 508 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZDHHC13Q8IUH4 622 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 SLC44A2Q8IWA5 706 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 C9orf40Q8IXQ3 194 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CMIPQ8IY22 773 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PEX5LQ8IYB4 626 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CBR4Q8N4T8 237 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 BCORP1Q8N888 145 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 FAM71CQ8NEG0 241 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TOR1AIP2Q8NFQ8 470 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 NUBPLQ8TB37 319 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 SPPL2AQ8TCT8 520 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 GPR151Q8TDV0 419 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 DOK4Q8TEW6 326 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TFAP2CQ92754 450 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PROX1Q92786 737 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TPD52L3Q96J77 140 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 LCORQ96JN0 433 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 IMMP1LQ96LU5 166 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PIP5K1AQ99755 562 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CRB3Q9BUF7 120 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 G6PC3Q9BUM1 346 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CNPPD1Q9BV87 410 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ITPAQ9BY32 194 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ULBP3Q9BZM4 244 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 WWTR1Q9GZV5 400 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 HOXD1Q9GZZ0 328 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF700Q9H0M5 742 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ANKRD19PQ9H560 264 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 SOX17Q9H6I2 414 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TRIM45Q9H8W5 580 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PNO1Q9NRX1 252 aaKnown RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 C19orf25Q9UFG5 118 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 TMEFF2Q9UIK5 374 aaPredicted RBP6.11□□□□□ -1.43
ATG4A-207ENST00000474825 MKLN1Q9UL63 735 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 PADI1Q9ULC6 663 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 CBLCQ9ULV8 474 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 RAB26Q9ULW5 256 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 A4GNTQ9UNA3 340 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF232Q9UNY5 417 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 SH3GLB1Q9Y371 365 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 LYVE1Q9Y5Y7 322 aa6.11□□□□□ -1.43
ATG4A-207ENST00000474825 IGHV1-45A0A0A0MS14 117 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CENPVL1A0A0U1RR11 272 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 C2orf92A0A1B0GVN3 265 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 A0A1W2PQD3 144 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CDC14CA4D256 554 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PMS2P1A4D2B8 440 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 SAC3D1A6NKF1 404 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 C21orf140B9A014 251 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 C9J4A7 227 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 H0YAE9 185 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 hCG_2039718K7EN88 272 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms