RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 EXOSC6Q5RKV6 272 aaKnown RBP12.54□□□□□ -0.4
USF1-205ENST00000473969 FNDC7Q5VTL7 733 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 BLOC1S3Q6QNY0 202 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
USF1-205ENST00000473969 CD163Q86VB7 1156 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 MISPQ8IVT2 679 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 OR4C3Q8NH37 302 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 DUSP19Q8WTR2 217 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 SPDL1Q96EA4 605 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 SLC6A15Q9H2J7 730 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 DSN1Q9H410 356 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 TAS2R10Q9NYW0 307 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 FLRT3Q9NZU0 649 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
USF1-205ENST00000473969 LIPGQ9Y5X9 500 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 SVILO95425 2214 aa12.54□□□□□ -0.4
USF1-205ENST00000473969 MYO18BQ8IUG5 2567 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 TMEM247A6NEH6 219 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 FIGNL2A6NMB9 653 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 GTPBP1O00178 669 aaKnown RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ZCCHC18P0CG32 403 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ENDOUP21128 410 aaKnown RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 DPP4P27487 766 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 SRD5A2P31213 254 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 CDKN2CP42773 168 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 MAGEA8P43361 318 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ATP12AP54707 1039 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 DSCR4P56555 118 aaPredicted RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 23.4
USF1-205ENST00000473969 RCAN2Q14206 197 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.41e-7■■■■□ 25.6
USF1-205ENST00000473969 ARHGAP11BQ3KRB8 267 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 GXYLT1Q4G148 440 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 EIPR1Q53HC9 387 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 TMEM211Q6ICI0 200 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 AAGABQ6PD74 315 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 YRDCQ86U90 279 aaKnown RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 ZNF614Q8N883 585 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 CHDHQ8NE62 594 aaPredicted RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 FAM83FQ8NEG4 500 aaPredicted RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 OR5M9Q8NGP3 310 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 RNF138Q8WVD3 245 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 SDF2Q99470 211 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
USF1-205ENST00000473969 RAD21L1Q9H4I0 556 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 FBXO34Q9NWN3 711 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 MED11Q9P086 117 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 KCNE3Q9Y6H6 103 aa12.53□□□□□ -0.4
USF1-205ENST00000473969 A0A1W2PQD3 144 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 MSX1P28360 303 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 DCTP40126 519 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 CRATP43155 626 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 ZFP36L2P47974 494 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 SMSP52788 366 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 GAS1P54826 345 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 GANABQ14697 944 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 GPR68Q15743 365 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 WIPI1Q5MNZ9 446 aaPredicted RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 SLC2A7Q6PXP3 512 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 ENPP6Q6UWR7 440 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 IFNEQ86WN2 208 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 GATSQ8NAP1 163 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 PHOSPHO1Q8TCT1 267 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 GTF2H4Q92759 462 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 RAB8BQ92930 207 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 ABTB1Q969K4 478 aaPredicted RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 THUMPD1Q9NXG2 353 aaKnown RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 KLHL14Q9P2G3 628 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 LEF1Q9UJU2 399 aaPredicted RBP12.52□□□□□ -0.41
USF1-205ENST00000473969 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 SLC6A5Q9Y345 797 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 WDR45Q9Y484 360 aa12.52□□□□□ -0.41
USF1-205ENST00000473969 NINQ8N4C6 2090 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 A0A096LPI6 279 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 E9PLN8 166 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 ANGPT2O15123 496 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 GMFGO60234 142 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 WDR1O75083 606 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 ACTL6AO96019 429 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms