RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 TP53P04637 393 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 PSMB1P20618 241 aaKnown RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 EDNRAP25101 427 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 AGTR1P30556 359 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 STX2P32856 288 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 CTBP2P56545 445 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 RPS3AP61247 264 aaKnown RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 GNG11P61952 73 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 TRA2BP62995 288 aaKnown RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 FGFBP1Q14512 234 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 CHRFAM7AQ494W8 412 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 FIGNL1Q6PIW4 674 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 TMEM107Q6UX40 140 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 LSRQ86X29 649 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 GABRG1Q8N1C3 465 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 CDYL2Q8N8U2 506 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 GATSQ8NAP1 163 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 ABHD3Q8WU67 409 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF524Q96C55 264 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 ERP27Q96DN0 273 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 C11orf24Q96F05 449 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 STMN4Q9H169 189 aaPredicted RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 BRF2Q9HAW0 419 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 FAM120CQ9NX05 1096 aaKnown RBP11.23□□□□□ -0.61
TRAF4-209ENST00000473421 MCM8Q9UJA3 840 aa11.23□□□□□ -0.61
TRAF4-209ENST00000473421 IGLV3-32A0A0A0MS00 114 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 CCDC189A1A4V9 331 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 A8MT66 165 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 MYO1GB0I1T2 1018 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 ADAMDEC1O15204 470 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 PCDH7O60245 1069 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TMCC2O75069 709 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 IL33O95760 270 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 IFNA2P01563 188 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 HSD17B3P37058 310 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 MAGEA12P43365 314 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 BTKQ06187 659 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 CSTF3Q12996 717 aaKnown RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 GANABQ14697 944 aaKnown RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF672Q499Z4 452 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 CYP27C1Q4G0S4 372 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 C6orf52Q5T4I8 152 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 KLC3Q6P597 504 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TFAP2EQ6VUC0 442 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 FAM9CQ8IZT9 166 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 PIK3R3Q92569 461 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 GFM2Q969S9 779 aaKnown RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 FBXW5Q969U6 566 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 GTPBP3Q969Y2 492 aaKnown RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TRMT61AQ96FX7 289 aaKnown RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TRAF4Q9BUZ4 470 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TRIM2Q9C040 744 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 PTGES2Q9H7Z7 377 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 FBXO34Q9NWN3 711 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 TAS2R9Q9NYW1 312 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 ABCG2Q9UNQ0 655 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 C19orf53Q9UNZ5 99 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-209ENST00000473421 GPR52Q9Y2T5 361 aa11.22□□□□□ -0.61
TRAF4-209ENST00000473421 ESYT3A0FGR9 886 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SHISA9B4DS77 424 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF814B7Z6K7 855 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 ZSCAN12O43309 604 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SSX4O60224 188 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 OTCP00480 354 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 FAM157CP0CG43 387 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 COL6A2P12110 1019 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 FCGR2AP12318 317 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 GABRA3P34903 492 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SERPINB8P50452 374 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 RNF144AP50876 292 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-209ENST00000473421 C21orf58P58505 322 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 IRX1P78414 480 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-209ENST00000473421 PRR5P85299 388 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 NAB1Q13506 487 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 GLYR1Q49A26 553 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-209ENST00000473421 UNC50Q53HI1 259 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 TUSC5Q8IXB3 177 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SPATA4Q8NEY3 305 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 OSTF1Q92882 214 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 RNF145Q96MT1 663 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 KCNA7Q96RP8 456 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 NAPGQ99747 312 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-209ENST00000473421 GLIPR2Q9H4G4 154 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SDHAF3Q9NRP4 125 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 B3GALT5Q9Y2C3 310 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 TIMM22Q9Y584 194 aa11.21□□□□□ -0.61
TRAF4-209ENST00000473421 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.62
TRAF4-209ENST00000473421 A0A1W2PP18 115 aa11.2□□□□□ -0.62
TRAF4-209ENST00000473421 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms