RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TRPV5Q9NQA5 729 aa19.73■□□□□ 0.75
COL18A1-207ENST00000473212 PRDM7Q9NQW5 492 aa19.73■□□□□ 0.75
COL18A1-207ENST00000473212 EXTL2Q9UBQ6 330 aa19.73■□□□□ 0.75
COL18A1-207ENST00000473212 GPSM3Q9Y4H4 160 aa19.73■□□□□ 0.75
COL18A1-207ENST00000473212 MUC22E2RYF6 1773 aaPredicted RBP19.73■□□□□ 0.75
COL18A1-207ENST00000473212 MYO15AQ9UKN7 3530 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 ZC3H12DA2A288 527 aaKnown RBP19.72■□□□□ 0.75
COL18A1-207ENST00000473212 SOCS6O14544 535 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 MID1O15344 667 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 HRO43593 1189 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 FGF19O95750 216 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 HSD17B2P37059 387 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 VASPP50552 380 aaPredicted RBP19.72■□□□□ 0.75
COL18A1-207ENST00000473212 ADAM15Q13444 863 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 FGL2Q14314 439 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 SLC9A5Q14940 896 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 FAM78AQ5JUQ0 283 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 IDNKQ5T6J7 187 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 BHLHB9Q6PI77 547 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 TMEM64Q6YI46 380 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 NR2C2APQ86WQ0 139 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 OSTF1Q92882 214 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 MOSPD1Q9UJG1 213 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 POLHQ9Y253 713 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 EXOGQ9Y2C4 368 aaKnown RBP19.72■□□□□ 0.75
COL18A1-207ENST00000473212 HSPB11Q9Y547 144 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 CENPVL1A0A0U1RR11 272 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 CLEC3AO75596 197 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 FZD5Q13467 585 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 FAM209AQ5JX71 171 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 ZNF322Q6U7Q0 402 aaPredicted RBP19.72■□□□□ 0.75
COL18A1-207ENST00000473212 NRMQ8IXM6 262 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 SLC37A3Q8NCC5 494 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 OR4M1Q8NGD0 313 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 PTGFRNQ9P2B2 879 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 ADAM30Q9UKF2 790 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 CBLCQ9ULV8 474 aa19.72■□□□□ 0.75
COL18A1-207ENST00000473212 IGHA1P01876 353 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 HIST1H1TP22492 207 aaPredicted RBP19.71■□□□□ 0.75
COL18A1-207ENST00000473212 MAB21L1Q13394 359 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 PGGHGQ32M88 737 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SIRT6Q8N6T7 355 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 OR52N1Q8NH53 320 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SUSD6Q92537 303 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 GTPBP2Q9BX10 602 aaKnown RBP19.71■□□□□ 0.75
COL18A1-207ENST00000473212 ASB6Q9NWX5 421 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 TNFRSF10DQ9UBN6 386 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SPEGQ15772 3267 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SYT5O00445 386 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SLC19A2O60779 497 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 EFCAB14O75071 495 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 HTR1FP30939 366 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 P2RX3P56373 397 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 ARPC4P59998 168 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 TGM3Q08188 693 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 ACSM1Q08AH1 577 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 C6orf132Q5T0Z8 1188 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 ASB18Q6ZVZ8 466 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 OR51G2Q8NGK0 314 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 SFXN5Q8TD22 340 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 TMEM255BQ8WV15 326 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 PITHD1Q9GZP4 211 aaPredicted RBP19.71■□□□□ 0.75
COL18A1-207ENST00000473212 IL20Q9NYY1 176 aa19.71■□□□□ 0.75
COL18A1-207ENST00000473212 APOBEC3BQ9UH17 382 aaKnown RBP19.71■□□□□ 0.75
COL18A1-207ENST00000473212 ZFR2Q9UPR6 939 aaKnown RBP19.71■□□□□ 0.75
COL18A1-207ENST00000473212 LANCL1O43813 399 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 PAHP00439 452 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 GAAP10253 952 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 ATP5A1P25705 553 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 PEBP1P30086 187 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 STAT5AP42229 794 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 PDX1P52945 283 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 MRPL28Q13084 256 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 ABHD17CQ6PCB6 329 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 IL20RBQ6UXL0 311 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 PLEKHM3Q6ZWE6 761 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 CPOQ8IVL8 374 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 REM2Q8IYK8 340 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 OR56A1Q8NGH5 318 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 AKAP1Q92667 903 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 TEX12Q9BXU0 123 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 SLC28A3Q9HAS3 691 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 HINT3Q9NQE9 182 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 H2AFY2Q9P0M6 372 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 ENTPD4Q9Y227 616 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 GTPBP1O00178 669 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 CFL1P23528 166 aaKnown RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 FPR3P25089 353 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 GPR176Q14439 515 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 IRF4Q15306 451 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 FAM111BQ6SJ93 734 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 NUP43Q8NFH3 380 aa19.7■□□□□ 0.74
COL18A1-207ENST00000473212 ACOT11Q8WXI4 607 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 SIRT4Q9Y6E7 314 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-207ENST00000473212 A0A1B0GVC2 190 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 CARNS1A5YM72 827 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 A6NIN4 97 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 CDC42EP2O14613 210 aa19.69■□□□□ 0.74
COL18A1-207ENST00000473212 RNF13O43567 381 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms