RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 GSTA2P09210 222 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 PSMA4P25789 261 aaKnown RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 FAPQ12884 760 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 EFR3AQ14156 821 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 GGTA1PQ4G0N0 100 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 TTC19Q6DKK2 380 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 ALKBH2Q6NS38 261 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 ADAM5Q6NVV9 412 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 METTL2BQ6P1Q9 378 aaKnown RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 FBXO25Q8TCJ0 367 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 ZNF483Q8TF39 744 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 EXOSC8Q96B26 276 aaKnown RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 C11orf24Q96F05 449 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 TNFRSF13CQ96RJ3 184 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 ACTR6Q9GZN1 396 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 ALG2Q9H553 416 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 MAGED1Q9Y5V3 778 aaPredicted RBP8.31□□□□□ -1.08
VCL-204ENST00000472585 ZNF780BQ9Y6R6 833 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 MALRD1Q5VYJ5 2156 aa8.31□□□□□ -1.08
VCL-204ENST00000472585 CADP27708 2225 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 IGLV3-32A0A0A0MS00 114 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 A0A0J9YW62 118 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 GXYLT2A0PJZ3 443 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 CCDC189A1A4V9 331 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 STX16-NPEPL1H3BU86 382 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 STX16O14662 325 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 CLOCKO15516 846 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 KCNAB3O43448 404 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 EFNA2O43921 213 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 SSX4O60224 188 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 OR4F21O95013 312 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 PGRP06401 933 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 FESP07332 822 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 RPS17P08708 135 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 HNF1AP20823 631 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 PTNP21246 168 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 SHC1P29353 583 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 IL12BP29460 328 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 ARL1P40616 181 aaPredicted RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 MAGEA12P43365 314 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 PLTPP55058 493 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 EEFSECP57772 596 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 TRA2BP62995 288 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 IFT88Q13099 833 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 SH2D4BQ5SQS7 431 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 NCMAPQ5T1S8 102 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 LGSNQ5TDP6 509 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 CYB5R2Q6BCY4 276 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 NUFIP2Q7Z417 695 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 GALNT10Q86SR1 603 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 GBP7Q8N8V2 638 aaPredicted RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 OR6K3Q8NGY3 331 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 OR10D3Q8NH80 312 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 POC1BQ8TC44 478 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 C16orf78Q8WTQ4 265 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 SMAP2Q8WU79 429 aaPredicted RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 SELENOMQ8WWX9 145 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 S100PBPQ96BU1 408 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 ZNF524Q96C55 264 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 ERP27Q96DN0 273 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 MTBPQ96DY7 904 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 APIPQ96GX9 242 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 TACO1Q9BSH4 297 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 VPS11Q9H270 941 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 ELOVL6Q9H5J4 265 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 BRF2Q9HAW0 419 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 VPS29Q9UBQ0 182 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 DMGDHQ9UI17 866 aaKnown RBP8.3□□□□□ -1.08
VCL-204ENST00000472585 PSME2Q9UL46 239 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 SAR1BQ9Y6B6 198 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 AP4B1Q9Y6B7 739 aa8.3□□□□□ -1.08
VCL-204ENST00000472585 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 FAM234BA2RU67 622 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 DPRXA6NFQ7 191 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 MYO1GB0I1T2 1018 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 UPK1AO00322 258 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 MANBAO00462 879 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 EIF1AYO14602 144 aaKnown RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 ADAMDEC1O15204 470 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 CXCL13O43927 109 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 LMX1BO60663 402 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 RAMP1O60894 148 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 GUCY1B2O75343 617 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 BCAS2O75934 225 aaPredicted RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 PSMG1O95456 288 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 IL33O95760 270 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 BMP2P12643 396 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 SNRPBP14678 240 aaKnown RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 PSMB1P20618 241 aaKnown RBP8.29□□□□□ -1.08
VCL-204ENST00000472585 EDNRAP25101 427 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 TYK2P29597 1187 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 HSD17B3P37058 310 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 HTR6P50406 440 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 NUDT6P53370 316 aa8.29□□□□□ -1.08
VCL-204ENST00000472585 VLDLRP98155 873 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms