RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SRD5A2P31213 254 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 PER3P56645 1201 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 C17orf67Q0P5P2 114 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 C3AR1Q16581 482 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ARHGAP11BQ3KRB8 267 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ATAD3BQ5T9A4 648 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 C1QL3Q5VWW1 255 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 AP1ARQ63HQ0 302 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 HEPHL1Q6MZM0 1159 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 CGB2Q6NT52 195 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ZAR1Q86SH2 424 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 MARCH3Q86UD3 253 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 EID3Q8N140 333 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 NEIL3Q8TAT5 605 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ZFP90Q8TF47 636 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 SARAFQ96BY9 339 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 OR2B2Q9GZK3 357 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 EXO5Q9H790 373 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 SLC52A3Q9NQ40 469 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
SDC3-203ENST00000471567 ERRFI1Q9UJM3 462 aaPredicted RBP13.93□□□□□ -0.18
SDC3-203ENST00000471567 A0A096LPI6 279 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 NR5A2O00482 541 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 SCDO00767 359 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 NDUFB5O43674 189 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 ANGPTL1O95841 491 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 OR12D1P0DN82 309 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 ATP12AP54707 1039 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 TOMM20Q15388 145 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 C6orf10Q5SRN2 563 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 MTFR2Q6P444 385 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 TNFAIP8L2Q6P589 184 aaPredicted RBP13.92□□□□□ -0.18
SDC3-203ENST00000471567 APOOLQ6UXV4 268 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 C16orf62Q7Z3J2 963 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 GALNT10Q86SR1 603 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 RNF130Q86XS8 419 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 MISPQ8IVT2 679 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 FADS6Q8N9I5 356 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 ZNF527Q8NB42 609 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 OR4K17Q8NGC6 315 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 DUSP19Q8WTR2 217 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 TSPEARQ8WU66 669 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 XAGE5Q8WWM1 108 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 RTN4RQ9BZR6 473 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 SLC6A15Q9H2J7 730 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 POLE3Q9NRF9 147 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 FLNCQ14315 2725 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 DNAJC13O75165 2243 aa13.92□□□□□ -0.18
SDC3-203ENST00000471567 BAHCC1Q9P281 2608 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 A0A1W2PP18 115 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 WIPF3A6NGB9 483 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NPIPA2E9PIF3 369 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NPIPB9F8W1W9 429 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NPIPA3F8WFD2 350 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 HMGN4O00479 90 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 CCL21O00585 134 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 STX11O75558 287 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 TPOP07202 933 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 CAPN3P20807 821 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 ENDOUP21128 410 aaKnown RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 MSX1P28360 303 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 GCKP35557 465 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 CASP9P55211 416 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 DSCR4P56555 118 aaPredicted RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 GANABQ14697 944 aaKnown RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 FLYWCH1Q4VC44 716 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NHSL2Q5HYW2 709 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 LRIF1Q5T3J3 769 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 OR5M10Q6IEU7 315 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 SLC2A7Q6PXP3 512 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 MTERF4Q7Z6M4 381 aaKnown RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 FJX1Q86VR8 437 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 FAM83FQ8NEG4 500 aaPredicted RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 OR2M3Q8NG83 312 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 SSC4DQ8WTU2 575 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 OIT3Q8WWZ8 545 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 ZNF350Q9GZX5 532 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 PAIP1Q9H074 479 aaKnown RBP13.91□□□□□ -0.18
SDC3-203ENST00000471567 DSN1Q9H410 356 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 PTGES2Q9H7Z7 377 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 TPT1P8Q9HAU6 139 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 SLC6A13Q9NSD5 602 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 TINAGQ9UJW2 476 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 FBXL2Q9UKC9 423 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 ACAD8Q9UKU7 415 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 LIPT1Q9Y234 373 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 HRH3Q9Y5N1 445 aa13.91□□□□□ -0.18
SDC3-203ENST00000471567 NCKAP5O14513 1909 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 E9PLN8 166 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 ZNHIT1O43257 154 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 LDLRP01130 860 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
SDC3-203ENST00000471567 DPP4P27487 766 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 DCTP40126 519 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 MVDP53602 400 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 STX5Q13190 355 aa13.9□□□□□ -0.18
SDC3-203ENST00000471567 GXYLT1Q4G148 440 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms