RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
UBXN4-207ENST00000471246 LRP4O75096 1905 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 NUP214P35658 2090 aaPredicted RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 A0A0U1RQG5 324 aaPredicted RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 A0A1W2PRV1 198 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 TMEM89A2RUT3 159 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PSMB11A5LHX3 300 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 LRCOL1A6NCL2 159 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 IMPA2O14732 288 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PPIHO43447 177 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 NME2P1O60361 137 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF324O75467 553 aaPredicted RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CABYRO75952 493 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CXCL14O95715 111 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 INSP01308 110 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 IGHV3-48P01763 117 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 GNSP15586 552 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF18P17022 549 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 HNRNPA2B1P22626 353 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 HOXD10P28358 340 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ADORA2BP29275 332 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 NTSP30990 170 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 RPL4P36578 427 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CTRLP40313 264 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 RPS10P46783 165 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 RPL29P47914 159 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 STARP49675 285 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CNN1P51911 297 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 LIM2P55344 173 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 KIAA1024LP59773 190 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 RND3P61587 244 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ROR1Q01973 937 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PAX5Q02548 391 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 SRYQ05066 204 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PPP1R8Q12972 351 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PTGES3Q15185 160 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 UBE2V2Q15819 145 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 LRRC36Q1X8D7 754 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF674Q2M3X9 581 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PARP6Q2NL67 630 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 HFEQ30201 348 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CYBRD1Q53TN4 286 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ARMC3Q5W041 872 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 OLFM4Q6UX06 510 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 DLEU7Q6UYE1 221 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF562Q6V9R5 426 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 P4HA3Q7Z4N8 544 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 SERPINA9Q86WD7 417 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 IFNEQ86WN2 208 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 C17orf82Q86X59 251 aaPredicted RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 UNC45BQ8IWX7 931 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 SFRP1Q8N474 314 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 BPIFB2Q8N4F0 458 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ARFGAP2Q8N6H7 521 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 SUMF2Q8NBJ7 301 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 OR2AP1Q8NGE2 309 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 OR2A12Q8NGT7 310 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 OR9A1PQ8NGU1 263 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 WDR36Q8NI36 951 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ST7LQ8TDW4 575 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PHYHIPQ92561 330 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 MCHR2Q969V1 340 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CCDC51Q96ER9 411 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 DTD2Q96FN9 168 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 CBWD1Q9BRT8 395 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 VCXQ9H320 206 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 NARFLQ9H6Q4 476 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 APMAPQ9HDC9 416 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 FANCFQ9NPI8 374 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 RBM28Q9NW13 759 aaKnown RBP0.81□□□□□ -2.28
UBXN4-207ENST00000471246 NDUFA13Q9P0J0 144 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ANKMY1Q9P2S6 941 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZNF225Q9UK10 706 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 SMC3Q9UQE7 1217 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 IFT52Q9Y366 437 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ZMYM6O95789 1325 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 METP08581 1390 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PARD3Q8TEW0 1356 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 ANKRD30BQ9BXX2 1392 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 PTCH1Q13635 1447 aa0.81□□□□□ -2.28
UBXN4-207ENST00000471246 KIF26AQ9ULI4 1882 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 A0A0U1RRA0 63 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 MACROD2A1Z1Q3 448 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 A6NDX4 124 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ZSCAN5BA6NJL1 495 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 C19orf81C9J6K1 198 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ALOX15BO15296 676 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 BBOX1O75936 387 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 AKR7A3O95154 331 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CHRNA1P02708 482 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 IGHV4-34P06331 123 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 SLC35G4P0C7Q5 338 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CCNCP24863 283 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 ATP5DP30049 168 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 CDH5P33151 784 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 GCKP35557 465 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 NUDT1P36639 197 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 PMELP40967 661 aa0.8□□□□□ -2.28
UBXN4-207ENST00000471246 DHPSP49366 369 aaPredicted RBP0.8□□□□□ -2.28
UBXN4-207ENST00000471246 EMDP50402 254 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms