RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 DYNC1I1O14576 645 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 CDC40O60508 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
FN1-216ENST00000469569 EDF1O60869 148 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 HPNP05981 417 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 ALDOCP09972 364 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 ESRRAP11474 423 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 GABRA1P14867 456 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 AGAP20933 346 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 TBXA2RP21731 343 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 GDF1P27539 372 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 EVI2BP34910 448 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 PTGER1P34995 402 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 SOAT1P35610 550 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 CHI3L1P36222 383 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 CA7P43166 264 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 POLR2JP52435 117 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 SMSP52788 366 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 KCNK10P57789 538 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 UFM1P61960 85 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 LASP1Q14847 261 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 SPANXN4Q5MJ08 99 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 EXOSC6Q5RKV6 272 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 WLSQ5T9L3 541 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 TRILQ7L0X0 811 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 C6orf120Q7Z4R8 191 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 PLCZ1Q86YW0 608 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 PM20D2Q8IYS1 436 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 SIMC1Q8NDZ2 872 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 NEIL3Q8TAT5 605 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 FAM57AQ8TBR7 257 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 FAM110BQ8TC76 370 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 SSC4DQ8WTU2 575 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 TSPEARQ8WU66 669 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 RNF138Q8WVD3 245 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 JADE3Q92613 823 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 NEURL3Q96EH8 262 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 GIMAP5Q96F15 307 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 RMND5BQ96G75 393 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 PANX1Q96RD7 426 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 CITED4Q96RK1 184 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 MDFIQ99750 246 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 TP63Q9H3D4 680 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 CCDC134Q9H6E4 229 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 CXorf36Q9H7Y0 433 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 ANKRA2Q9H9E1 313 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 PROK2Q9HC23 129 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 POLE3Q9NRF9 147 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 LIPT1Q9Y234 373 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 WIF1Q9Y5W5 379 aa8.34□□□□□ -1.07
FN1-216ENST00000469569 USP9XQ93008 2570 aaPredicted RBP8.34□□□□□ -1.07
FN1-216ENST00000469569 FLNBO75369 2602 aaKnown RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 SPTBN1Q01082 2364 aaKnown RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 TRGV8A0A0C4DH27 118 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 RNF103-CHMP3A0A140T963 221 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 A0A1W2PQD3 144 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 TMEM247A6NEH6 219 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 CCDC154A6NI56 674 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 LRRC3CA6NJW4 275 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 FAM166BA8MTA8 275 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 ALG1L2C9J202 215 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 E9PLN8 166 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 G3V3Y1 287 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 SCDO00767 359 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 RFXANKO14593 260 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 LRRTM2O43300 516 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 FADS1O60427 444 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 SCN2BO60939 215 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 WDR1O75083 606 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 KCNK2O95069 426 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 UTS2O95399 124 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 ANP32DO95626 131 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 CPSF4O95639 269 aaKnown RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 ACTL6AO96019 429 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 CYP4B1P13584 511 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 MATN1P21941 496 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 PPIBP23284 216 aaKnown RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 SRD5A2P31213 254 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 MAGEA5P43359 124 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 UQCRFS1P47985 274 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 KHKP50053 298 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 DSCR4P56555 118 aaPredicted RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 WNT3P56703 355 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 PLAURQ03405 335 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 GNA13Q14344 377 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 SQLEQ14534 574 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 DUSP5Q16690 384 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 GLYR1Q49A26 553 aaPredicted RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 AP1ARQ63HQ0 302 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 AAGABQ6PD74 315 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 ENPP6Q6UWR7 440 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 ANGPTL8Q6UXH0 198 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 SLC16A11Q8NCK7 471 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 OR4K17Q8NGC6 315 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 OR52N2Q8NGI0 321 aa8.33□□□□□ -1.08
FN1-216ENST00000469569 PHF10Q8WUB8 498 aaKnown RBP8.33□□□□□ -1.08
FN1-216ENST00000469569 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms