RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 GABRG1Q8N1C3 465 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 ZNF619Q8N2I2 560 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 HSD17B8Q92506 261 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 HBEGFQ99075 208 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 TRIM2Q9C040 744 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 AMBRA1Q9C0C7 1298 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 ALG2Q9H553 416 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 NGBQ9NPG2 151 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 SLC35C2Q9NQQ7 365 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 FBXO34Q9NWN3 711 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 NMRK1Q9NWW6 199 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 TMEM160Q9NX00 188 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 SENP1Q9P0U3 644 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 XPR1Q9UBH6 696 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 VPS29Q9UBQ0 182 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 VDAC3Q9Y277 283 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 SNX8Q9Y5X2 465 aa11.42□□□□□ -0.58
TRAPPC12-216ENST00000469400 FAM234BA2RU67 622 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 STX16O14662 325 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 TNFSF11O14788 317 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 COQ9O75208 318 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 NTN1O95631 604 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 IL33O95760 270 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 ANGPTL1O95841 491 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 FESP07332 822 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 TUBBP07437 444 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 ZNF17P17021 662 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 IL32P24001 234 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 MPIP34949 423 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 RFX3P48380 749 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 SRSF2Q01130 221 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 BSPH1Q075Z2 132 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 SFRP5Q5T4F7 317 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 LETMD1Q6P1Q0 360 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 SEZ6L2Q6UXD5 910 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 APOOLQ6UXV4 268 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 DTX2Q86UW9 622 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 EXOC3L1Q86VI1 746 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 FAM9CQ8IZT9 166 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 PLD6Q8N2A8 252 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 OR10H5Q8NGA6 315 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 PIWIL2Q8TC59 973 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 MRRFQ96E11 262 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 TNFRSF13CQ96RJ3 184 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 NPAS1Q99742 590 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 TBL1XR1Q9BZK7 514 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 GIMAP4Q9NUV9 329 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 CISD1Q9NZ45 108 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 MCM8Q9UJA3 840 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 SNX6Q9UNH7 406 aa11.41□□□□□ -0.58
TRAPPC12-216ENST00000469400 PCDH7O60245 1069 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 RAMP1O60894 148 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 UTS2O95399 124 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 OTCP00480 354 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 TSPAN8P19075 237 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 TYK2P29597 1187 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 THBS2P35442 1172 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 CDH13P55290 713 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 RAE1P78406 368 aaKnown RBP11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 PRR5P85299 388 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 VLDLRP98155 873 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 HEPACAMQ14CZ8 416 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 NRF1Q16656 503 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 GTF2IRD2BQ6EKJ0 949 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 TFAP2EQ6VUC0 442 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 ESPNLQ6ZVH7 1005 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 GTF2IRD2Q86UP8 949 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 GTPBP8Q8N3Z3 284 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 CEP112Q8N8E3 955 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 OR2V1Q8NHB1 315 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 ROBO4Q8WZ75 1007 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 ERP44Q9BS26 406 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 VPS11Q9H270 941 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 Q9N2J8 555 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 DMGDHQ9UI17 866 aaKnown RBP11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 ZNF225Q9UK10 706 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 MRTO4Q9UKD2 239 aaKnown RBP11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 SVEP1Q4LDE5 3571 aa11.4□□□□□ -0.58
TRAPPC12-216ENST00000469400 A0A087WV62 115 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 A0A087WZY1 265 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 A0A0J9YW62 118 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 GNG14A0A1W2PPG7 69 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 UPK1AO00322 258 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 RPS17P08708 135 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 RBP1P09455 135 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 CHN1P15882 459 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 PTNP21246 168 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 PSMA4P25789 261 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 MAGEA4P43358 317 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 NUDT6P53370 316 aa11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 PSMD4P55036 377 aaKnown RBP11.39□□□□□ -0.59
TRAPPC12-216ENST00000469400 CASP9P55211 416 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms