RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TANKQ92844 425 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRD9Q96BM1 317 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TESCQ96BS2 214 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TBC1D20Q96BZ9 403 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 LRRC58Q96CX6 371 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 COQ8BQ96D53 544 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MTERF3Q96E29 417 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 C11orf24Q96F05 449 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CNRIP1Q96F85 164 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RBM18Q96H35 190 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DGAT2Q96PD7 388 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GBP5Q96PP8 586 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PANX1Q96RD7 426 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CDRT15Q96T59 188 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC39A3Q9BRY0 314 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 BTBD10Q9BSF8 475 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 THUMPD3Q9BV44 507 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SPATA5L1Q9BVQ7 753 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CHST8Q9H2A9 424 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GLIPR2Q9H4G4 154 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ANKRA2Q9H9E1 313 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 LYRM4Q9HD34 91 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC52A3Q9NQ40 469 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC35C2Q9NQQ7 365 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NECTIN3Q9NQS3 549 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FBXO8Q9NRD0 319 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MRGBPQ9NV56 204 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MRPS18AQ9NVS2 196 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MS4A12Q9NXJ0 267 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TAS2R1Q9NYW7 299 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 VSX1Q9NZR4 365 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FOXJ2Q9P0K8 574 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 BCAP29Q9UHQ4 241 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CES1P1Q9UKY3 287 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 VPS4AQ9UN37 437 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MRPS33Q9Y291 106 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 WBP11Q9Y2W2 641 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 L3MBTL1Q9Y468 752 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PCDHGB6Q9Y5F9 930 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MDC1Q14676 2089 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SCN2AQ99250 2005 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DNAH14Q0VDD8 3507 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A087WWL8 130 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A096LPI6 279 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 IGHV3-20A0A0C4DH32 117 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CENPVL1A0A0U1RR11 272 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 DYTNA2CJ06 578 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 UNC119BA6NIH7 251 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 BBIP1A8MTZ0 92 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 EVPLLA8MZ36 301 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 MYO1GB0I1T2 1018 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 C9J4A7 227 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CLIC1O00299 241 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SCN2BO60939 215 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 PDE5AO76074 875 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SORBS2O94875 1100 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SCELO95171 688 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SPDEFO95238 335 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 BMP10O95393 424 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 C1QCP02747 245 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CPMP14384 443 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 NQO1P15559 274 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 TCN2P20062 427 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 MAKP20794 623 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 UQCRC2P22695 453 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 PPP2R1BP30154 601 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC5A2P31639 672 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CRATP43155 626 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 TRPC1P48995 793 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CCT3P49368 545 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 MRPL19P49406 292 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 ERFP50548 548 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 CDK9P50750 372 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 PGDP52209 483 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC7A2P52569 658 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 OR4D2P58180 307 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 MTPNP58546 118 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 RPS7P62081 194 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 KCNJ2P63252 427 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 HBA1P69905 142 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 MRPS35P82673 323 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 EIF3IQ13347 325 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 TP53BP2Q13625 1128 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 RAB32Q13637 225 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 PDE7AQ13946 482 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 RCAN2Q14206 197 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SELPLGQ14242 412 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 HLXQ14774 488 aaPredicted RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 NSDHLQ15738 373 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 TRMT12Q53H54 448 aaKnown RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 LACTB2Q53H82 288 aaPredicted RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 RUNDC3AQ59EK9 446 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 C6orf163Q5TEZ5 329 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM91A1Q658Y4 838 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 SP5Q6BEB4 398 aaPredicted RBP3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 NANOGP8Q6NSW7 305 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 TMEM107Q6UX40 140 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 DLEU7Q6UYE1 221 aa3.79□□□□□ -1.8
TMEM39A-204ENST00000468545 DGAT2L6Q6ZPD8 337 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms