RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SZRD1Q7Z422 152 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 NUDCD3Q8IVD9 361 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 OR6Y1Q8NGX8 325 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 PPP1R14CQ8TAE6 165 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 DUSP19Q8WTR2 217 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 FAM222BQ8WU58 562 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 SLC9A6Q92581 669 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 RMND5BQ96G75 393 aaPredicted RBP17.28■□□□□ 0.36
COL7A1-207ENST00000467985 PRPF18Q99633 342 aaKnown RBP17.28■□□□□ 0.36
COL7A1-207ENST00000467985 ATAD3AQ9NVI7 634 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 JKAMPQ9P055 326 aa17.28■□□□□ 0.36
COL7A1-207ENST00000467985 F8P00451 2351 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 IGLV3-32A0A0A0MS00 114 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 GXYLT2A0PJZ3 443 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 TMEM120BA0PK00 339 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 B4DXG7 233 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 EEF1E1-BLOC1S5C9J1V9 151 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 TM9SF1O15321 606 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 EEF1E1O43324 174 aaKnown RBP17.27■□□□□ 0.36
COL7A1-207ENST00000467985 HSPA4LO95757 839 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 NGFRP08138 427 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 HK1P19367 917 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 ETV4P43268 484 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 SERPINB4P48594 390 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 SORDQ00796 357 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 STX5Q13190 355 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 FLYWCH1Q4VC44 716 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 C6orf136Q5SQH8 315 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 RAET1LQ5VY80 246 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 MFSD12Q6NUT3 480 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 MARCH3Q86UD3 253 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 GRAMD2AQ8IUY3 354 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 ZZZ3Q8IYH5 903 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 MEIOBQ8N635 442 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 PIK3R3Q92569 461 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 PAIP2Q9BPZ3 127 aaKnown RBP17.27■□□□□ 0.36
COL7A1-207ENST00000467985 PIGQQ9BRB3 760 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 G6PC3Q9BUM1 346 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 FLRT3Q9NZU0 649 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 CRIM1Q9NZV1 1036 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 MED11Q9P086 117 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 CLCF1Q9UBD9 225 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 ZDHHC2Q9UIJ5 367 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 ITGB1BP2Q9UKP3 347 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 KIAA1549Q9HCM3 1950 aa17.27■□□□□ 0.36
COL7A1-207ENST00000467985 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 CTAG2O75638 210 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 SNUPNO95149 360 aaKnown RBP17.26■□□□□ 0.35
COL7A1-207ENST00000467985 ANGPTL1O95841 491 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 ALOX5P09917 674 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 POU3F2P20265 443 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-207ENST00000467985 ARRB2P32121 409 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 PRIM2P49643 509 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 MAD2L1Q13257 205 aaPredicted RBP17.26■□□□□ 0.35
COL7A1-207ENST00000467985 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL7A1-207ENST00000467985 GRAMD1BQ3KR37 738 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 CPTPQ5TA50 214 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 HHATQ5VTY9 493 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 OR2A2Q6IF42 318 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 FNDC5Q8NAU1 212 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 C1GALT1C1Q96EU7 318 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 GIMAP5Q96F15 307 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 PIGMQ9H3S5 423 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 DNAJB12Q9NXW2 375 aaKnown RBP17.26■□□□□ 0.35
COL7A1-207ENST00000467985 STOML1Q9UBI4 398 aa17.26■□□□□ 0.35
COL7A1-207ENST00000467985 A0A1W2PRB8 838 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 C17orf51A8MQB3 221 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 BIRC5O15392 142 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 HCRTR2O43614 444 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 SKAP2O75563 359 aaPredicted RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 SOX30O94993 753 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 IGKV1D-16P01601 117 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 CRHP06850 196 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 ACP2P11117 423 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 PRPS1L1P21108 318 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 TBXA2RP21731 343 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 TCEA1P23193 301 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 AGFG1P52594 562 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 PTGR1Q14914 329 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 LSM12Q3MHD2 195 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 IL23RQ5VWK5 629 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 COX18Q8N8Q8 333 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 SLC16A11Q8NCK7 471 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 OR7A2PQ8NGA2 310 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 FAM110BQ8TC76 370 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 OR5P2Q8WZ92 322 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 INTS12Q96CB8 462 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 TUBGCP3Q96CW5 907 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 FAM120BQ96EK7 910 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 C3orf30Q96M34 536 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 C1orf50Q9BV19 199 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 RTN4RQ9BZR6 473 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 ZCCHC3Q9NUD5 404 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 GIMAP2Q9UG22 337 aa17.25■□□□□ 0.35
COL7A1-207ENST00000467985 EIF3LQ9Y262 564 aaKnown RBP17.25■□□□□ 0.35
COL7A1-207ENST00000467985 ITPR3Q14573 2671 aa17.24■□□□□ 0.35
COL7A1-207ENST00000467985 A0A087WZY1 265 aa17.24■□□□□ 0.35
COL7A1-207ENST00000467985 OR2M5A3KFT3 312 aa17.24■□□□□ 0.35
COL7A1-207ENST00000467985 TUBAL3A6NHL2 446 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms