RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SCO2O43819 266 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP1-206ENST00000467681 SLC19A2O60779 497 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 ANP32DO95626 131 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 HPNP05981 417 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 CAPN3P20807 821 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 GDF1P27539 372 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 PTGS2P35354 604 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 MVDP53602 400 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 SEC24CP53992 1094 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 ATP12AP54707 1039 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 GYS2P54840 703 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 SRSF1Q07955 248 aaKnown RBP eCLIP12.41□□□□□ -0.42
SSBP1-206ENST00000467681 C17orf67Q0P5P2 114 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 PAGE3Q5JUK9 113 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 ATAD3BQ5T9A4 648 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 OR5M10Q6IEU7 315 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 CLEC18BQ6UXF7 455 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 CLEC18CQ8NCF0 446 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 RELTQ969Z4 430 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 LDAHQ9H6V9 325 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 HHATLQ9HCP6 504 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 MRGBPQ9NV56 204 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 SLAMF8Q9P0V8 285 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 MRPS18CQ9Y3D5 142 aaKnown RBP12.41□□□□□ -0.42
SSBP1-206ENST00000467681 HRH3Q9Y5N1 445 aa12.41□□□□□ -0.42
SSBP1-206ENST00000467681 DOPEY2Q9Y3R5 2298 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 IGLV3-32A0A0A0MS00 114 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 A0A1B0GUH1 482 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 PRAMEF27A3QJZ7 478 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 OR14I1A6ND48 311 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 HMGN4O00479 90 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 AQP7O14520 342 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ZIC3O60481 467 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 FCMRO60667 390 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 STX11O75558 287 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 OXSR1O95747 527 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ANGPTL1O95841 491 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 SNRPB2P08579 225 aaKnown RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ADSLP30566 484 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 LSP1P33241 339 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 KHKP50053 298 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ANXA11P50995 505 aaKnown RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 GTDC1Q4AE62 458 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 KLHL26Q53HC5 615 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 COX20Q5RI15 118 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 LRIF1Q5T3J3 769 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 DNAJC14Q6Y2X3 702 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 DOLPP1Q86YN1 238 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 FADS6Q8N9I5 356 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 C10orf82Q8WW14 230 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ROPN1LQ96C74 230 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
SSBP1-206ENST00000467681 SAP130Q9H0E3 1048 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 DSN1Q9H410 356 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 POLE3Q9NRF9 147 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 FAM53CQ9NYF3 392 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 MED11Q9P086 117 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 PPP4R1LQ9P1A2 415 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 FBXL2Q9UKC9 423 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 LIPT1Q9Y234 373 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 NDUFAF1Q9Y375 327 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 GMEB1Q9Y692 573 aa12.4□□□□□ -0.42
SSBP1-206ENST00000467681 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 A0A1W2PQD3 144 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 C17orf51A8MQB3 221 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 B4DXG7 233 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 CLIC1O00299 241 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 SCDO00767 359 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 NDUFB5O43674 189 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 SEMA7AO75326 666 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 HPGDP15428 266 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 ABOP16442 354 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 HOXB9P17482 250 aaPredicted RBP12.39□□□□□ -0.43
SSBP1-206ENST00000467681 DRD4P21917 467 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 SRD5A2P31213 254 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 CA7P43166 264 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 CASP6P55212 293 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 TOMM20Q15388 145 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 ZNF141Q15928 474 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 C3AR1Q16581 482 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 GXYLT1Q4G148 440 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 C4orf17Q53FE4 359 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSBP1-206ENST00000467681 DLEU7Q6UYE1 221 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 C16orf62Q7Z3J2 963 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 YRDCQ86U90 279 aaKnown RBP12.39□□□□□ -0.43
SSBP1-206ENST00000467681 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 FAM26EQ8N5C1 309 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 DPP10Q8N608 796 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 OR2M3Q8NG83 312 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 OR4K17Q8NGC6 315 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 NEIL3Q8TAT5 605 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 FAM57AQ8TBR7 257 aa12.39□□□□□ -0.43
SSBP1-206ENST00000467681 PNPT1Q8TCS8 783 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms