RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR4C15Q8NGM1 316 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 FGF14Q92915 247 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 DNAJA3Q96EY1 480 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 LINC00615Q96LM1 132 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 NPLQ9BXD5 320 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 SEMA6CQ9H3T2 930 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 LDAHQ9H6V9 325 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 B4GALT7Q9UBV7 327 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ATG4BQ9Y4P1 393 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 B4GAT1O43505 415 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 UBL4AP11441 157 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 FUT1P19526 365 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 GADD45AP24522 165 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 SMCO1Q147U7 214 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 SPNS2Q8IVW8 549 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 SLC37A2Q8TED4 501 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 GINS4Q9BRT9 223 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF717Q9BY31 904 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 OR52A5Q9H2C5 316 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 CBLCQ9ULV8 474 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF443Q9Y2A4 671 aaPredicted RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 LRIT2A6NDA9 550 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 OR2T1O43869 369 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 WNT4P56705 351 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 NCS1P62166 190 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ENTPD8Q5MY95 495 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 RHBDD1Q8TEB9 315 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 TIGARQ9NQ88 270 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 UBQLN4Q9NRR5 601 aa12.94□□□□□ -0.34
BRAT1-203ENST00000467558 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
BRAT1-203ENST00000467558 BRINP1O60477 761 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SLC19A2O60779 497 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 ACVR1BP36896 505 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 GIPRP48546 466 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 DCAF7P61962 342 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 LPAL2Q16609 132 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 BTBD16Q32M84 506 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SNX29P2Q8IUI4 249 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SAMD12Q8N8I0 201 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 C16orf58Q96GQ5 468 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 MRGPRX1Q96LB2 322 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 OR1F2PQ96R84 312 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SAP130Q9H0E3 1048 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 OLAHQ9NV23 265 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 PPT2Q9UMR5 302 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 NOS1APO75052 506 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 GLULP15104 373 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 OPRD1P41143 372 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 PIP5KL1Q5T9C9 394 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 RAET1LQ5VY80 246 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 LEG1Q6P5S2 330 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 LMF2Q9BU23 707 aaKnown RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 HDHD5Q9BXW7 423 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 UBAP1Q9NZ09 502 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 CSNK1G3Q9Y6M4 447 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 C12orf71A8MTZ7 269 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 CBX5P45973 191 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 EFR3AQ14156 821 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF791Q3KP31 576 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 B3GNT7Q8NFL0 401 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 CPNE2Q96FN4 548 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 UBE2ZQ9H832 354 aaPredicted RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 H0Y8X5 98 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 C1QAP02745 245 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 P04436 131 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 SLC19A1P41440 591 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 CCINQ13939 588 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 PPP1R3BQ86XI6 285 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 ZFP41Q8N8Y5 198 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 OR51Q1Q8NH59 317 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 ASB15Q8WXK1 588 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 DPAGT1Q9H3H5 408 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 ENAMQ9NRM1 1142 aa12.93□□□□□ -0.34
BRAT1-203ENST00000467558 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 TESQ9UGI8 421 aaKnown RBP12.93□□□□□ -0.34
BRAT1-203ENST00000467558 A0A1B0GTW7 788 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 WASHC1A8K0Z3 465 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 H3BSH0 61 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 PHYHO14832 338 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 OR1D4P47884 311 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF84P51523 738 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 ALG10Q5BKT4 473 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 COX20Q5RI15 118 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 GARNL3Q5VVW2 1013 aa12.92□□□□□ -0.34
BRAT1-203ENST00000467558 TCEAL6Q6IPX3 200 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms