RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 HPNP05981 417 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 PTPN6P29350 595 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 ADH7P40394 386 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 PSMD4P55036 377 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 TP53BP2Q13625 1128 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 LASP1Q14847 261 aaKnown RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 FBXL19-AS1Q494R0 122 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 EIPR1Q53HC9 387 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 WIPI1Q5MNZ9 446 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 SPATA19Q7Z5L4 167 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 GALNT10Q86SR1 603 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 PLCZ1Q86YW0 608 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 LACC1Q8IV20 430 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 LRRC8CQ8TDW0 803 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 DYDC1Q8WWB3 177 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 OTUB1Q96FW1 271 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 SH3GL2Q99962 352 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 PCDHGB4Q9UN71 923 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 SLC6A5Q9Y345 797 aa12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-211ENST00000467553 HMGB1P1B2RPK0 211 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 KLF11O14901 512 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 FADS1O60427 444 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 GOSR1O95249 250 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 UTS2O95399 124 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 IL2RAP01589 272 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 IGKV1D-16P01601 117 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 ALDOCP09972 364 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 CEACAM8P31997 349 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 EVI2BP34910 448 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 SOAT1P35610 550 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 MAP3K8P41279 467 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 KIR2DL3P43628 341 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 CLK3P49761 638 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 C21orf58P58505 322 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 UFM1P61960 85 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 HBA1P69905 142 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 DUSP5Q16690 384 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 FIGNL1Q6PIW4 674 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 CAMKMTQ7Z624 323 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 LIX1LQ8IVB5 337 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 LRRC34Q8IZ02 419 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 COX18Q8N8Q8 333 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 FAM83FQ8NEG4 500 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 OR5AK3PQ8NH89 298 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 PIWIL2Q8TC59 973 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 FOXC2Q99958 501 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 PRDM14Q9GZV8 571 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 SDHAF3Q9NRP4 125 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 WIF1Q9Y5W5 379 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 ITPR3Q14573 2671 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
CCHCR1-211ENST00000467553 C17orf51A8MQB3 221 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CTAG2O75638 210 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 KCNK2O95069 426 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 TCEA1P23193 301 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 DNAJA1P31689 397 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 S100A3P33764 101 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 GCKP35557 465 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 ASCL1P50553 236 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CLNS1AP54105 237 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 GAS1P54826 345 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 DLX5P56178 289 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 WNT3P56703 355 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CRYZQ08257 329 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 STX5Q13190 355 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 GRAMD1BQ3KR37 738 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OGFOD2Q6N063 350 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 MARCH3Q86UD3 253 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 ANKRD46Q86W74 232 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 VPS37AQ8NEZ2 397 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OR4K17Q8NGC6 315 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OR8J2Q8NGG1 315 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OR56A1Q8NGH5 318 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OR4A15Q8NGL6 344 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 OR14L1PQ8NHC6 308 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 PSMA8Q8TAA3 256 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 ADAMTS15Q8TE58 950 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 DUSP19Q8WTR2 217 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 FAM222BQ8WU58 562 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 HOXB13Q92826 284 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CDS1Q92903 461 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 RNASE6Q93091 150 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 TIMP4Q99727 224 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 ACTRT3Q9BYD9 372 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CXXC4Q9H2H0 198 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 DSN1Q9H410 356 aa12.77□□□□□ -0.37
CCHCR1-211ENST00000467553 CALHM2Q9HA72 323 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms