RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PDHBP11177 359 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 LAMP1P11279 417 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 BCL3P20749 454 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PSMA5P28066 241 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 CHI3L1P36222 383 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PRPHP41219 470 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 FNTAP49354 379 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 BDH1Q02338 343 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PLOD1Q02809 727 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PUDPQ08623 228 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 SNTB2Q13425 540 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATXN7L3Q14CW9 347 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 CELF3Q5SZQ8 465 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 RNLSQ5VYX0 342 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 GCNT7Q6ZNI0 430 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAM43BQ6ZT52 329 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 SERINC5Q86VE9 423 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PPP1R16AQ96I34 528 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PRODH2Q9UF12 536 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 GSTK1Q9Y2Q3 226 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR10H1Q9Y4A9 318 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 A0A1W2PNV4 684 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAM74A7A6NL05 159 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 A8MX80 341 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 SAP18O00422 153 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 MAGEB3O15480 346 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 PHF1O43189 567 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF253O75346 499 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 CRLF1O75462 422 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RHBDL1O75783 438 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RHOBTB1O94844 696 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 UFL1O94874 794 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ADCY5O95622 1261 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ALPIP09923 528 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 HNRNPA2B1P22626 353 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 GATA2P23769 480 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RPL4P36578 427 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ACVR1BP36896 505 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RND3P61587 244 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 PAX2Q02962 417 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 PDK4Q16654 411 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 TEX44Q53QW1 395 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RABGAP1LQ5R372 815 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR8G2PQ6IF36 304 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 BLOC1S2Q6QNY1 142 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 CES3Q6UWW8 571 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 HSCBQ8IWL3 235 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC39A11Q8N1S5 342 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 NANPQ8TBE9 248 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RLN3Q8WXF3 142 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 C18orf25Q96B23 403 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 SDSLQ96GA7 329 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 TXN2Q99757 166 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 TMEM121Q9BTD3 319 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ELOVL4Q9GZR5 314 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 POLR1EQ9GZS1 481 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 RAB33BQ9H082 229 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 UTP6Q9NYH9 597 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 DPM3Q9P2X0 92 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 SNX6Q9UNH7 406 aa3.37□□□□□ -1.87
CDC42BPA-211ENST00000466538 ESYT2A0FGR8 921 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 CCT8L1PA6NM43 557 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 BCL2L11O43521 198 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR1F1O43749 312 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 BCAS1O75363 584 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 B3GAT3O94766 335 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 TBX6O95947 436 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 PGAM2P15259 253 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATP6V1C1P21283 382 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 NT5EP21589 574 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATP5A1P25705 553 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 HMGCLP35914 325 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 XCR1P46094 333 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 GNPDA1P46926 289 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 IFNAR2P48551 515 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 NOVA1P51513 510 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 KRTAP10-9P60411 292 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 RIPPLY1Q0D2K3 151 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 SELPLGQ14242 412 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 KCNJ11Q14654 390 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC10A1Q14973 349 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 USH1GQ495M9 461 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 EIPR1Q53HC9 387 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 TCTEX1D4Q5JR98 221 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 SPATA46Q5T0L3 261 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATAD3BQ5T9A4 648 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 METTL11BQ5VVY1 283 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF57Q68EA5 555 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 C2orf66Q6UXQ4 117 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 BAIAP2L2Q6UXY1 529 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 DPY19L4Q7Z388 723 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 TMEM17Q86X19 198 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 UNC5CLQ8IV45 518 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 SPEM1Q8N4L4 309 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 AENQ8WTP8 325 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms